U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    Eif4ebp3 eukaryotic translation initiation factor 4E binding protein 3 [ Mus musculus (house mouse) ]

    Gene ID: 108112, updated on 27-Nov-2024

    Summary

    Official Symbol
    Eif4ebp3provided by MGI
    Official Full Name
    eukaryotic translation initiation factor 4E binding protein 3provided by MGI
    Primary source
    MGI:MGI:1270847
    See related
    Ensembl:ENSMUSG00000090264 AllianceGenome:MGI:1270847
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4e-bp3
    Summary
    Predicted to enable eukaryotic initiation factor 4E binding activity. Predicted to be involved in negative regulation of translational initiation. Predicted to be located in nucleus. Predicted to be active in cytoplasm. Is expressed in gut; male reproductive gland or organ; and metanephros. Orthologous to human EIF4EBP3 (eukaryotic translation initiation factor 4E binding protein 3). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in colon adult (RPKM 90.8), liver E18 (RPKM 18.7) and 10 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Eif4ebp3 in Genome Data Viewer
    Location:
    18 B2; 18 19.46 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (36797113..36799377)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (36664060..36666324)

    Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene solute carrier family 4, sodium bicarbonate cotransporter, member 9 Neighboring gene ankyrin repeat and KH domain containing 1 Neighboring gene STARR-seq mESC enhancer starr_44296 Neighboring gene proteasome (prosome, macropain) subunit, alpha type 4 pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E5653 Neighboring gene steroid receptor RNA activator 1 Neighboring gene amyloid beta precursor protein binding family B member 3 Neighboring gene solute carrier family 35, member A4

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (2) 

    Pathways from PubChem

    General gene information

    Markers

    Readthrough Maskbp3

    Readthrough gene: Maskbp3, Included gene: Ankhd1

    Clone Names

    • MGC74395, MGC130577

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables eukaryotic initiation factor 4E binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables eukaryotic initiation factor 4E binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in negative regulation of translational initiation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in negative regulation of translational initiation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    eukaryotic translation initiation factor 4E-binding protein 3
    Names
    eIF4E-binding protein 3

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_201256.4NP_957708.1  eukaryotic translation initiation factor 4E-binding protein 3

      See identical proteins and their annotated locations for NP_957708.1

      Status: VALIDATED

      Source sequence(s)
      AC115631, AY226182, CX565744
      Consensus CDS
      CCDS29155.1
      UniProtKB/Swiss-Prot
      Q2TA53, Q80VV3
      Related
      ENSMUSP00000039298.8, ENSMUST00000036765.8
      Conserved Domains (1) summary
      pfam05456
      Location:5101
      eIF_4EBP; Eukaryotic translation initiation factor 4E binding protein (EIF4EBP)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000084.7 Reference GRCm39 C57BL/6J

      Range
      36797113..36799377
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)