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    CG10338 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 35124, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG10338provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032700
    Locus tag
    Dmel_CG10338
    See related
    AllianceGenome:FB:FBgn0032700
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG10338
    Summary
    Is expressed in several structures, including adult head; embryonic/larval garland cell; ganglia; garland cell primordium; and larval nervous system. Orthologous to human RUSF1 (RUS family member 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG10338 in Genome Data Viewer
    Location:
    37A1-37A1; 2-54 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (18695664..18698571)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (18695664..18698571)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene male-specific lethal 1 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. ROOT UV-B SENSITIVE2 acts with ROOT UV-B SENSITIVE1 in a root ultraviolet B-sensing pathway. Leasure CD, et al. Plant Physiol, 2009 Aug. PMID 19515790, Free PMC Article
    2. Misexpression screen delineates novel genes controlling Drosophila lifespan. Paik D, et al. Mech Ageing Dev, 2012 May. PMID 22366109, Free PMC Article
    3. Isolation of gene sets affected specifically by polyglutamine expression: implication of the TOR signaling pathway in neurodegeneration. Nelson B, et al. Cell Death Differ, 2005 Aug. PMID 15861189
    4. Nociceptor-Enriched Genes Required for Normal Thermal Nociception. Honjo K, et al. Cell Rep, 2016 Jul 12. PMID 27346357, Free PMC Article
    5. Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach. Pazos Obregón F, et al. BMC Genomics, 2015 Sep 15. PMID 26370122, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG10338-PA
    CG10338-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      18695664..18698571
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299127.1 → NP_001286056.1  uncharacterized protein Dmel_CG10338, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286056.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VJ63
      Conserved Domains (1) summary
      pfam04884
      Location:40 → 279
      DUF647; Vitamin B6 photo-protection and homoeostasis

    2. NM_136053.3 → NP_609897.2  uncharacterized protein Dmel_CG10338, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609897.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VJ63
      Related
      FBpp0080646
      Conserved Domains (1) summary
      pfam04884
      Location:40 → 279
      DUF647; Vitamin B6 photo-protection and homoeostasis
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8SYV7 Q8SYV7
    Q9VJ63 Q9VJ63

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