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    SKA3 spindle and kinetochore associated complex subunit 3 [ Bos taurus (domestic cattle) ]

    Gene ID: 509921, updated on 1-Jan-2025

    Summary

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    Official Symbol
    SKA3provided by VGNC
    Official Full Name
    spindle and kinetochore associated complex subunit 3provided by VGNC
    Primary source
    VGNC:VGNC:34645
    See related
    BGD:BT16036; Ensembl:ENSBTAG00000003314
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    C12H13ORF3
    Orthologs
    human mouse all
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    Genomic context

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    See SKA3 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 12 NC_037339.1 (35583971..35597394)

    Chromosome 12 - NC_037339.1Genomic Context describing neighboring genes Neighboring gene mitochondrial calcium uptake 2 Neighboring gene uncharacterized LOC107132993 Neighboring gene zinc finger DHHC-type palmitoyltransferase 20 Neighboring gene mitochondrial ribosomal protein L57 Neighboring gene Sin3A associated protein 18 Neighboring gene large tumor suppressor kinase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037339.1 Chromosome 12 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC137359

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in chromosome segregation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in kinetochore IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of outer kinetochore IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in spindle microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SKA complex subunit 3
    Names
    spindle and kinetochore-associated protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001110067.2 → NP_001103537.2  SKA complex subunit 3

      See identical proteins and their annotated locations for NP_001103537.2

      Status: VALIDATED

      Source sequence(s)
      AJ688300, BC112513, CB222005, CK771708, CK947368, DY153310
      UniProtKB/Swiss-Prot
      A8PUI7
      Related
      ENSBTAP00000004289.5, ENSBTAT00000004289.7
      Conserved Domains (2) summary
      cd12957
      Location:3 → 101
      SKA3_N; Spindle and kinetochore-associated protein 3, N-terminal domain
      cl25495
      Location:242 → 372
      Endomucin; Endomucin

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037339.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      35583971..35597394
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A8PUI7.2 GenPept UniProtKB/Swiss-Prot:A8PUI7

    Gene LinkOut

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    Research Materials