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    osr1 dehydrogenase [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2539138, updated on 18-Sep-2024

    Summary

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    Official Symbol
    osr1
    Official Full Name
    dehydrogenase
    Primary source
    PomBase:SPCC663.06c
    Locus tag
    SPOM_SPCC663.06C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See osr1 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    1
    Sequence:
    Chromosome: III; NC_003421.2 (1644754..1645876, complement)

    Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene GTPAse-interacting protein Neighboring gene 60S ribosomal protein L39 Neighboring gene ncRNA Neighboring gene histone H3-H4 chaperone Asf1 Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene short chain dehydrogenase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003421.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. YKL071W from Saccharomyces cerevisiae encodes a novel aldehyde reductase for detoxification of glycolaldehyde and furfural derived from lignocellulose. Wang H, et al. Appl Microbiol Biotechnol, 2017 Dec. PMID 29034432
    2. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
    3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables oxidoreductase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in cellular detoxification of aldehyde ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    dehydrogenase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003421.2 Reference assembly

      Range
      1644754..1645876 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001023258.2 → NP_588268.1  dehydrogenase [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_588268.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q7Z9I4
      Conserved Domains (2) summary
      cd05325
      Location:8 → 252
      carb_red_sniffer_like_SDR_c; carbonyl reductase sniffer-like, classical (c) SDRs
      pfam00106
      Location:6 → 198
      adh_short; short chain dehydrogenase
    Nucleotide Protein
    Heading Accession and Version

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