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    CG11550 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43731, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG11550provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039864
    Locus tag
    Dmel_CG11550
    See related
    AllianceGenome:FB:FBgn0039864
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG11550
    Summary
    Predicted to enable phosphatidylinositol bisphosphate binding activity. Human ortholog(s) of this gene implicated in familial isolated deficiency of vitamin E. Orthologous to human TTPA (alpha tocopherol transfer protein). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG11550 in Genome Data Viewer
    Location:
    100D1-100D1; 3-102 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (31678147..31679880, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (27503869..27505602, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene partner of drosha Neighboring gene kekkon 6 Neighboring gene Zinc finger MYND-type containing 8 Neighboring gene long non-coding RNA:CR44091 Neighboring gene long non-coding RNA:CR45564

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Body size in Drosophila: genetic architecture, allometries and sexual dimorphism. Carreira VP, et al. Heredity (Edinb), 2009 Mar. PMID 19018274
    2. Identifying candidate genes affecting developmental time in Drosophila melanogaster: pervasive pleiotropy and gene-by-environment interaction. Mensch J, et al. BMC Dev Biol, 2008 Aug 8. PMID 18687152, Free PMC Article
    3. Gene-by-temperature interactions and candidate plasticity genes for morphological traits in Drosophila melanogaster. Carreira VP, et al. PLoS One, 2013. PMID 23936253, Free PMC Article
    4. A buoyancy-based screen of Drosophila larvae for fat-storage mutants reveals a role for Sir2 in coupling fat storage to nutrient availability. Reis T, et al. PLoS Genet, 2010 Nov 11. PMID 21085633, Free PMC Article
    5. The genetic basis of natural variation in mushroom body size in Drosophila melanogaster. Zwarts L, et al. Nat Commun, 2015 Dec 11. PMID 26656654, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables phosphatidylinositol bisphosphate binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG11550-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      31678147..31679880 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143625.2 → NP_651882.1  uncharacterized protein Dmel_CG11550 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651882.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V5F0, Q9V9V4
      Related
      FBpp0085226
      Conserved Domains (1) summary
      pfam00650
      Location:94 → 239
      CRAL_TRIO; CRAL/TRIO domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9V9V4 Q9V9V4

    Gene LinkOut

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