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    Arpc5 Actin-related protein 2/3 complex, subunit 5 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33444, updated on 9-Dec-2024

    Summary

    Official Symbol
    Arpc5provided by FlyBase
    Official Full Name
    Actin-related protein 2/3 complex, subunit 5provided by FlyBase
    Primary source
    FLYBASE:FBgn0031437
    Locus tag
    Dmel_CG9881
    See related
    AllianceGenome:FB:FBgn0031437
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    ArpC5; ARPC5; CG9881; Dmel\CG9881; p16; p16-arc; p16-ARC; P16-ARC
    Summary
    Predicted to enable actin filament binding activity. Predicted to be a structural constituent of cytoskeleton. Involved in regulation of actin filament polymerization. Located in lamellipodium. Is expressed in organism. Used to study candidiasis. Human ortholog(s) of this gene implicated in primary immunodeficiency disease. Orthologous to human ARPC5 (actin related protein 2/3 complex subunit 5) and ARPC5L (actin related protein 2/3 complex subunit 5 like). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Arpc5 in Genome Data Viewer
    Location:
    23A1-23A1; 2-7 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (2580292..2581423)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (2580292..2581423)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Early boundary activity 2 Neighboring gene NADH dehydrogenase (ubiquinone) B17.2 subunit Neighboring gene Dynamin related protein 1 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44790

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables actin filament binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables structural constituent of cytoskeleton ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in Arp2/3 complex-mediated actin nucleation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in Arp2/3 complex-mediated actin nucleation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in Arp2/3 complex-mediated actin nucleation ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in cell migration IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of actin filament polymerization IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of actin filament polymerization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of Arp2/3 protein complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of Arp2/3 protein complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of Arp2/3 protein complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in lamellipodium IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    Actin-related protein 2/3 complex, subunit 5
    Names
    Arpc5-PA
    Arpc5-PB
    CG9881-PA
    CG9881-PB
    p16-ARC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      2580292..2581423
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001273016.1NP_001259945.1  Actin-related protein 2/3 complex, subunit 5, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259945.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VQD8
      Conserved Domains (1) summary
      pfam04699
      Location:9147
      P16-Arc; ARP2/3 complex 16 kDa subunit (p16-Arc)
    2. NM_134849.3NP_608693.1  Actin-related protein 2/3 complex, subunit 5, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608693.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VQD8
      Related
      FBpp0077378
      Conserved Domains (1) summary
      pfam04699
      Location:9147
      P16-Arc; ARP2/3 complex 16 kDa subunit (p16-Arc)