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    CG13123 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34303, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG13123provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032150
    Locus tag
    Dmel_CG13123
    See related
    AllianceGenome:FB:FBgn0032150
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13123
    Summary
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in epidermal cell differentiation and regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in organism. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG13123 in Genome Data Viewer
    Location:
    30D1-30D1; 2-36 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (9791961..9793107, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (9791961..9793107, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene hairpin RNA:CR18854 Neighboring gene Inositol 1,4,5-triphosphate kinase 1 Neighboring gene nicotinic Acetylcholine Receptor alpha6 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR43766 Neighboring gene long non-coding RNA:CR44701

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in epidermal cell differentiation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13123-PA
    CG13123-PB
    CG13123-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      9791961..9793107 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001273371.1 → NP_001260300.1  uncharacterized protein Dmel_CG13123, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260300.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PD20
      Conserved Domains (2) summary
      PHA00733
      Location:122 → 219
      PHA00733; hypothetical protein
      sd00017
      Location:175 → 192
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. NM_001273372.1 → NP_001260301.1  uncharacterized protein Dmel_CG13123, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260301.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PD20
      Conserved Domains (2) summary
      PHA00733
      Location:122 → 219
      PHA00733; hypothetical protein
      sd00017
      Location:175 → 192
      ZF_C2H2; C2H2 Zn finger [structural motif]

    3. NM_135471.3 → NP_609315.1  uncharacterized protein Dmel_CG13123, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609315.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VL80
      Related
      FBpp0079507
      Conserved Domains (3) summary
      PHA00733
      Location:175 → 272
      PHA00733; hypothetical protein
      sd00017
      Location:228 → 245
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam07776
      Location:6 → 82
      zf-AD; Zinc-finger associated domain (zf-AD)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PD20 M9PD20
    Q9VL80 Q9VL80

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