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    SUPT7L SPT7-like STAGA complex gamma subunit [ Gallus gallus (chicken) ]

    Gene ID: 421421, updated on 17-Aug-2024

    Summary

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    Symbol
    SUPT7Lprovided by CGNC
    Full Name
    SPT7-like STAGA complex gamma subunitprovided by CGNC
    Primary source
    CGNC:7639
    See related
    Ensembl:ENSGALG00010020091
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See SUPT7L in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (27446327..27512069)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (27372134..27437907)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121113188 Neighboring gene uncharacterized LOC121110339 Neighboring gene uncharacterized LOC421419 Neighboring gene solute carrier family 4 member 1 adaptor protein Neighboring gene uncharacterized LOC112532074 Neighboring gene leucine rich repeat and fibronectin type III domain containing 2 Neighboring gene uncharacterized LOC107052917

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SAGA complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    STAGA complex 65 subunit gamma

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      27446327..27512069
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046939303.1 → XP_046795259.1  STAGA complex 65 subunit gamma

      UniProtKB/TrEMBL
      F1N8A3

    2. XM_419474.7 → XP_419474.2  STAGA complex 65 subunit gamma

      UniProtKB/TrEMBL
      F1N8A3
      Related
      ENSGALP00010028614.1, ENSGALT00010048524.1
      Conserved Domains (1) summary
      cl22885
      Location:149 → 223
      TAF9; TATA Binding Protein (TBP) Associated Factor 9 (TAF9) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      27372134..27437907
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046914504.1 → XP_046770460.1  STAGA complex 65 subunit gamma

      UniProtKB/TrEMBL
      F1N8A3

    2. XM_040667728.2 → XP_040523662.1  STAGA complex 65 subunit gamma

      UniProtKB/TrEMBL
      F1N8A3
      Conserved Domains (1) summary
      cl22885
      Location:149 → 223
      TAF9; TATA Binding Protein (TBP) Associated Factor 9 (TAF9) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex
    Nucleotide Protein Strain
    Heading Accession and Version

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