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    RAB28 RAB28, member RAS oncogene family [ Trichechus manatus latirostris (Florida manatee) ]

    Gene ID: 101354301, updated on 8-Mar-2024

    Summary

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    Gene symbol
    RAB28
    Gene description
    RAB28, member RAS oncogene family
    See related
    EnsemblRapid:ENSTMLG00000018541
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Trichechus manatus latirostris (sub-species: latirostris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Trichechidae; Trichechus
    Orthologs
    human mouse all
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    Genomic context

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    See RAB28 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_01 current TriManLat1.0 (GCF_000243295.1) Unplaced Scaffold NW_004444154.1 (2328188..2460231)

    NW_004444154.1Genomic Context describing neighboring genes Neighboring gene biorientation of chromosomes in cell division 1 like 1 Neighboring gene NK3 homeobox 2 Neighboring gene 26S proteasome non-ATPase regulatory subunit 12 pseudogene Neighboring gene heat shock cognate 71 kDa protein pseudogene Neighboring gene microtubule-associated protein RP/EB family member 1 pseudogene

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_004444154 Unplaced Scaffold Reference TriManLat1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras-related protein Rab-28

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000243295.1-RS_2024_01

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference TriManLat1.0 Primary Assembly

    Genomic

    1. NW_004444154.1 Reference TriManLat1.0 Primary Assembly

      Range
      2328188..2460231
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004388846.1 → XP_004388903.1  ras-related protein Rab-28 isoform X1

      UniProtKB/TrEMBL
      A0A2Y9E980
      Related
      ENSTMLP00000025967.1, ENSTMLT00000027851.1
      Conserved Domains (2) summary
      smart00175
      Location:64 → 229
      RAB; Rab subfamily of small GTPases
      cd04109
      Location:64 → 272
      Rab28; Rab GTPase family 28 (Rab28)

    2. XM_023742795.1 → XP_023598563.1  ras-related protein Rab-28 isoform X2

      UniProtKB/TrEMBL
      A0A2Y9S378
      Related
      ENSTMLP00000025986.1, ENSTMLT00000027871.1
      Conserved Domains (1) summary
      cd04109
      Location:64 → 271
      Rab28; Rab GTPase family 28 (Rab28)
    Nucleotide Protein
    Heading Accession and Version

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