U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    4933409K07Rik RIKEN cDNA 4933409K07 gene [ Mus musculus (house mouse) ]

    Gene ID: 108816, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    4933409K07Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 4933409K07 geneprovided by MGI
    Primary source
    MGI:MGI:1918429
    See related
    AllianceGenome:MGI:1918429
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    b1402
    Summary
    Is expressed in several structures, including brain; genitourinary system; hemolymphoid system gland; liver; and retina inner nuclear layer. [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See 4933409K07Rik in Genome Data Viewer
    Location:
    4 A5; 4 22.6 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (42031296..42055130, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 Unlocalized Scaffold NT_187053.1 (120552..144386)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene spermatogenesis associated 31 subfamily F member 1D Neighboring gene uncharacterized LOC118568647 Neighboring gene predicted gene, 20878 Neighboring gene predicted gene, 21093 Neighboring gene family with sequence similarity 205 pseudogene Neighboring gene C-C motif chemokine ligand 19, pseudogene 6 Neighboring gene family with sequence similarity 205 pseudogene

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Identification and mRNA expression of Ogdh, QP-C, and two predicted genes in the postnatal mouse brain. Sadakata T, et al. Neurosci Lett, 2006 Sep 25. PMID 16901643
    2. Functional and Evolutionary Diversification of Otx2 and Crx in Vertebrate Retinal Photoreceptor and Bipolar Cell Development. Yamamoto H, et al. Cell Rep, 2020 Jan 21. PMID 31968244
    3. A hybrid photoreceptor expressing both rod and cone genes in a mouse model of enhanced S-cone syndrome. Corbo JC, et al. PLoS Genet, 2005 Aug. PMID 16110338, Free PMC Article
    4. Three-dimensional visualization of testis cord morphogenesis, a novel tubulogenic mechanism in development. Combes AN, et al. Dev Dyn, 2009 May. PMID 19334288, Free PMC Article
    5. GUDMAP: the genitourinary developmental molecular anatomy project. McMahon AP, et al. J Am Soc Nephrol, 2008 Apr. PMID 18287559

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_033123.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BC072647, CT868690

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      42031296..42055130 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_178649.4: Suppressed sequence

      Description
      NM_178649.4: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.