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    SHO1 osmosensor SHO1 [ Nakaseomyces glabratus ]

    Gene ID: 2888306, updated on 6-Dec-2024

    Summary

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    Gene symbol
    SHO1
    Gene description
    osmosensor SHO1
    Locus tag
    GVI51_G03465
    See related
    FungiDB:GVI51_G03465; VEuPathDB:GVI51_G03465
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Nakaseomyces glabratus (strain: ATCC 2001, nat-host: Homo sapiens, culture-collection: ATCC:2001, type-material: type material of Cryptococcus glabratus)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces
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    Genomic context

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    See SHO1 in Genome Data Viewer
    Location:
    chromosome: G
    Exon count:
    1
    Sequence:
    Chromosome: G; NC_088957.1 (361962..363023, complement)

    Chromosome G - NC_088957.1Genomic Context describing neighboring genes Neighboring gene SUMO-targeted ubiquitin ligase complex subunit SLX8 Neighboring gene 60S ribosomal protein uL14 Neighboring gene aspartate/glutamate transporter Neighboring gene methionine aminopeptidase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_088957.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo genome assembly of Candida glabrata reveals cell wall protein complement and structure of dispersed tandem repeat arrays. Xu Z, et al. Mol Microbiol, 2020 Jun. PMID 32068314
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • CAGL0G03597g
      S. cerevisiae ortholog SHO1 has role in establishment of cell polarity, osmosensory signaling pathway, signal transduction involved in filamentous growth, cellular response to heat; osmosensitivity of CBS138 strain not seen in other strains

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of actin filament polymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    osmosensor SHO1
    XP_446520.1
    • CAGL0G03597g
      S. cerevisiae ortholog SHO1 has role in establishment of cell polarity, osmosensory signaling pathway, signal transduction involved in filamentous growth, cellular response to heat; osmosensitivity of CBS138 strain not seen in other strains

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_088957.1 Reference assembly

      Range
      361962..363023 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_446520.1 → XP_446520.1  osmosensor SHO1 [Nakaseomyces glabratus]

      See identical proteins and their annotated locations for XP_446520.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q6FTC4
      UniProtKB/TrEMBL
      A0A0W0D7T9
      Conserved Domains (1) summary
      cd11855
      Location:292 → 344
      SH3_Sho1p; Src homology 3 domain of High osmolarity signaling protein Sho1p
    Nucleotide Protein
    Heading Accession and Version

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