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    DNER delta/notch like EGF repeat containing [ Tupaia chinensis (Chinese tree shrew) ]

    Gene ID: 102475298, updated on 10-Mar-2024

    Summary

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    Gene symbol
    DNER
    Gene description
    delta/notch like EGF repeat containing
    Locus tag
    TREES_T100015671
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tupaia chinensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
    Orthologs
    human mouse all
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    Genomic context

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    See DNER in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006159525.1 (7882320..8117094)

    NW_006159525.1Genomic Context describing neighboring genes Neighboring gene thyroid hormone receptor interactor 12 Neighboring gene serine/threonine-protein kinase VRK1 pseudogene Neighboring gene general transcription factor 3C polypeptide 6 pseudogene Neighboring gene uncharacterized LOC114005250 Neighboring gene phosphotyrosine interaction domain containing 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006159525 Unplaced Scaffold Reference TupChi_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in establishment or maintenance of epithelial cell apical/basal polarity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of protein-containing complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    delta and Notch-like epidermal growth factor-related receptor
    Names
    Delta and Notch-like epidermal growth factor-related receptor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference TupChi_1.0

    Genomic

    1. NW_006159525.1 Reference TupChi_1.0

      Range
      7882320..8117094
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006141980.1 → XP_006142042.1  delta and Notch-like epidermal growth factor-related receptor

      Conserved Domains (1) summary
      cd00054
      Location:506 → 542
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    Nucleotide Protein
    Heading Accession and Version

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