U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    Rxfp2 relaxin/insulin-like family peptide receptor 2 [ Mus musculus (house mouse) ]

    Gene ID: 140498, updated on 9-Dec-2024

    Summary

    Official Symbol
    Rxfp2provided by MGI
    Official Full Name
    relaxin/insulin-like family peptide receptor 2provided by MGI
    Primary source
    MGI:MGI:2153463
    See related
    Ensembl:ENSMUSG00000053368 AllianceGenome:MGI:2153463
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Lgr8; Great; Gpr106
    Summary
    Enables protein-hormone receptor activity. Acts upstream of or within adenylate cyclase-activating G protein-coupled receptor signaling pathway and male gonad development. Predicted to be active in plasma membrane. Is expressed in several structures, including brain; genitourinary system; and peritoneum. Used to study cryptorchidism. Human ortholog(s) of this gene implicated in cryptorchidism. Orthologous to human RXFP2 (relaxin family peptide receptor 2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in testis adult (RPKM 1.6), subcutaneous fat pad adult (RPKM 1.2) and 9 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Rxfp2 in Genome Data Viewer
    Location:
    5 G3; 5 89.23 cM
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (149941487..150006015)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (150018675..150082550)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 38754 Neighboring gene STARR-seq mESC enhancer starr_14948 Neighboring gene soc-2 (suppressor of clear) homolog pseudogene Neighboring gene predicted gene, 38755 Neighboring gene STARR-seq mESC enhancer starr_14950 Neighboring gene predicted gene, 52797 Neighboring gene STARR-seq mESC enhancer starr_14951 Neighboring gene FRY microtubule binding protein Neighboring gene STARR-seq mESC enhancer starr_14952 Neighboring gene STARR-positive B cell enhancer mm9_chr5:151026173-151026473 Neighboring gene STARR-seq mESC enhancer starr_14953 Neighboring gene predicted gene, 36299

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G protein-coupled peptide receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables peptide hormone binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables peptide hormone binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein-hormone receptor activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within adenylate cyclase-activating G protein-coupled receptor signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in hormone-mediated signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within male gonad development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of apoptotic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of cell population proliferation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of cell population proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in oocyte maturation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in oocyte maturation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of cAMP-mediated signaling IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of cAMP-mediated signaling ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    relaxin receptor 2
    Names
    G protein coupled receptor affecting testicular descent
    G protein-coupled receptor 106
    leucine-rich repeat-containing G protein-coupled receptor 8

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001289564.1NP_001276493.1  relaxin receptor 2 isoform 2 precursor

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) lacks an alternate in-frame exon, compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
      Source sequence(s)
      AF346501, AK039086, BC144802, BM249687
      Consensus CDS
      CCDS80480.1
      UniProtKB/TrEMBL
      B7ZMU5, E9Q0U9
      Related
      ENSMUSP00000106122.2, ENSMUST00000110496.5
      Conserved Domains (6) summary
      cd00112
      Location:2863
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      cd00116
      Location:163319
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:122145
      LRR_RI; leucine-rich repeat [structural motif]
      pfam00001
      Location:391650
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      pfam13855
      Location:144204
      LRR_8; Leucine rich repeat
      cl21561
      Location:383602
      7tm_4; Olfactory receptor
    2. NM_001289566.1NP_001276495.1  relaxin receptor 2 isoform 3 precursor

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) uses an alternate in-frame splice site and lacks an alternate in-frame exon, compared to variant 1. The encoded isoform (3) is shorter than isoform 1.
      Source sequence(s)
      AC077689, AF346501, AK039086, BC144802, BM249687
      Consensus CDS
      CCDS80479.1
      UniProtKB/TrEMBL
      A0A0J9YV81, B7ZMU6
      Related
      ENSMUSP00000144536.2, ENSMUST00000201612.2
      Conserved Domains (7) summary
      cd00112
      Location:2863
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      cd00116
      Location:163333
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:122145
      LRR_RI; leucine-rich repeat [structural motif]
      pfam00001
      Location:405664
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      pfam12799
      Location:144185
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:144201
      LRR_8; Leucine rich repeat
      cl21561
      Location:397534
      7tm_4; Olfactory receptor
    3. NM_080468.2NP_536716.2  relaxin receptor 2 isoform 1 precursor

      See identical proteins and their annotated locations for NP_536716.2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
      Source sequence(s)
      AF346501, AK039086, BC120741, CJ243198
      Consensus CDS
      CCDS19886.1
      UniProtKB/Swiss-Prot
      Q0VB90, Q91ZZ5
      UniProtKB/TrEMBL
      B7ZMU5
      Related
      ENSMUSP00000067897.4, ENSMUST00000065745.10
      Conserved Domains (6) summary
      cd00112
      Location:2863
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      cd00116
      Location:163322
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:122145
      LRR_RI; leucine-rich repeat [structural motif]
      pfam00001
      Location:415674
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      pfam13855
      Location:144204
      LRR_8; Leucine rich repeat
      cl21561
      Location:407626
      7tm_4; Olfactory receptor

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      149941487..150006015
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036164780.1XP_036020673.1  relaxin receptor 2 isoform X3

      UniProtKB/TrEMBL
      B7ZMU5
      Conserved Domains (5) summary
      cd00112
      Location:2863
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      sd00033
      Location:96119
      LRR_RI; leucine-rich repeat [structural motif]
      cd14964
      Location:374400
      7tm_GPCRs; TM helix 1 [structural motif]
      cd21340
      Location:95316
      PPP1R42; protein phosphatase 1 regulatory subunit 42
      cl28897
      Location:374659
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    2. XM_011241023.4XP_011239325.1  relaxin receptor 2 isoform X5

      Conserved Domains (3) summary
      cd00112
      Location:3166
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      sd00033
      Location:125148
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:148207
      LRR_8; Leucine rich repeat
    3. XM_011241022.2XP_011239324.1  relaxin receptor 2 isoform X2

      UniProtKB/TrEMBL
      B7ZMU5
      Conserved Domains (6) summary
      COG4886
      Location:78327
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      cd00112
      Location:3166
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      sd00033
      Location:99122
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:122181
      LRR_8; Leucine rich repeat
      cd14964
      Location:377403
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:377662
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    4. XM_011241021.3XP_011239323.1  relaxin receptor 2 isoform X1

      UniProtKB/TrEMBL
      B7ZMU5
      Conserved Domains (6) summary
      COG4886
      Location:104353
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      cd00112
      Location:3166
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      sd00033
      Location:125148
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:148207
      LRR_8; Leucine rich repeat
      cd14964
      Location:403429
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:403688
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    5. XM_006504911.5XP_006504974.1  relaxin receptor 2 isoform X4

      Conserved Domains (4) summary
      COG4886
      Location:90292
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:92111
      LRR_RI; leucine-rich repeat [structural motif]
      cd14964
      Location:342368
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:342627
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily