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    Pdha2 pyruvate dehydrogenase E1 subunit alpha 2 [ Rattus rattus (black rat) ]

    Gene ID: 116895296, updated on 18-Mar-2024

    Summary

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    Gene symbol
    Pdha2
    Gene description
    pyruvate dehydrogenase E1 subunit alpha 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus rattus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Orthologs
    human mouse all
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    Genomic context

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    See Pdha2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current Rrattus_CSIRO_v1 (GCF_011064425.1) 3 NC_046156.1 (18692681..18694227, complement)

    Chromosome 3 - NC_046156.1Genomic Context describing neighboring genes Neighboring gene guanylate-binding protein 5-like Neighboring gene PDZ and LIM domain 5 Neighboring gene eukaryotic translation initiation factor 4B-like Neighboring gene unc-5 netrin receptor C

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_046156.1 Chromosome 3 Reference Rrattus_CSIRO_v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of cDNAs encoding the rat testis-specific E1 alpha subunit of the pyruvate dehydrogenase complex: comparison of expression of the corresponding mRNA with that of the somatic E1 alpha subunit. Cullingford TE, et al. Biochim Biophys Acta, 1993 Oct 19. PMID 7916643
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables pyruvate dehydrogenase (acetyl-transferring) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in acetyl-CoA biosynthetic process from pyruvate IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial
    Names
    pyruvate dehydrogenase (lipoamide)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rattus rattus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Rrattus_CSIRO_v1 Primary Assembly

    Genomic

    1. NC_046156.1 Reference Rrattus_CSIRO_v1 Primary Assembly

      Range
      18692681..18694227 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032896608.1 → XP_032752499.1  pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial isoform X1

      Conserved Domains (1) summary
      TIGR03182
      Location:59 → 371
      PDH_E1_alph_y; pyruvate dehydrogenase E1 component, alpha subunit

    2. XM_032896609.1 → XP_032752500.1  pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial isoform X2

      Conserved Domains (1) summary
      cl01629
      Location:59 → 345
      TPP_enzymes; Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. These enzymes include, among others, the E1 components of the pyruvate, the acetoin and ...
    Nucleotide Protein
    Heading Accession and Version

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