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    Zfp35 zinc finger protein 35 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 307547, updated on 9-Dec-2024

    Summary

    Official Symbol
    Zfp35provided by RGD
    Official Full Name
    zinc finger protein 35provided by RGD
    Primary source
    RGD:1312031
    See related
    EnsemblRapid:ENSRNOG00000049137 AllianceGenome:RGD:1312031
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Zfp239
    Summary
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Thymus (RPKM 74.6), Brain (RPKM 65.0) and 9 other tissues See more
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    Genomic context

    See Zfp35 in Genome Data Viewer
    Location:
    18p12
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 18 NC_086036.1 (15543604..15559084)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 18 NC_051353.1 (15268852..15284334)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 18 NC_005117.4 (15883182..15898803)

    Chromosome 18 - NC_086036.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 397 Neighboring gene zinc finger and SCAN domain containing 30 Neighboring gene proline-rich nuclear receptor coactivator 1. pseudogene 1 Neighboring gene zinc finger protein 24

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    zinc finger protein 271
    Names
    zinc finger protein 239

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001013141.2NP_001013159.1  zinc finger protein 271

      See identical proteins and their annotated locations for NP_001013159.1

      Status: PROVISIONAL

      Source sequence(s)
      JAXUCZ010000018
      UniProtKB/TrEMBL
      A0A096MJ05, A0A9K3Y763, Q5FVP4
      Related
      ENSRNOP00000067944.2, ENSRNOT00000076137.4
      Conserved Domains (3) summary
      COG5048
      Location:102486
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:106126
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:230255
      zf-H2C2_2; Zinc-finger double domain

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086036.1 Reference GRCr8

      Range
      15543604..15559084
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)