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    Tmem81 transmembrane protein 81 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 498229, updated on 27-Nov-2024

    Summary

    Official Symbol
    Tmem81provided by RGD
    Official Full Name
    transmembrane protein 81provided by RGD
    Primary source
    RGD:1561544
    See related
    EnsemblRapid:ENSRNOG00000028752 AllianceGenome:RGD:1561544
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to be located in membrane. Orthologous to human TMEM81 (transmembrane protein 81). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Testes (RPKM 62.4), Thymus (RPKM 24.4) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Tmem81 in Genome Data Viewer
    Location:
    13q13
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 13 NC_086031.1 (46491808..46494239)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 13 NC_051348.1 (43939677..43942108)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 13 NC_005112.4 (49277722..49280153)

    Chromosome 13 - NC_086031.1Genomic Context describing neighboring genes Neighboring gene transmembrane and coiled-coil domain family 2 Neighboring gene dual serine/threonine and tyrosine protein kinase Neighboring gene RB binding protein 5, histone lysine methyltransferase complex subunit Neighboring gene U6 spliceosomal RNA Neighboring gene contactin 2 Neighboring gene neurofascin

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001017490.1NP_001017490.1  transmembrane protein 81 precursor

      See identical proteins and their annotated locations for NP_001017490.1

      Status: PROVISIONAL

      Source sequence(s)
      BC079284
      UniProtKB/Swiss-Prot
      Q6AXW8
      UniProtKB/TrEMBL
      A6IC53
      Related
      ENSRNOP00000034105.3, ENSRNOT00000035335.5
      Conserved Domains (1) summary
      cd00096
      Location:100163
      Ig; Immunoglobulin domain

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086031.1 Reference GRCr8

      Range
      46491808..46494239
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)