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    CG33253 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 2768889, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG33253provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030992
    Locus tag
    Dmel_CG33253
    See related
    AllianceGenome:FB:FBgn0030992
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BEST:CK01423; CG14192; CG7633; CK01423; Dmel\CG33253
    Summary
    Predicted to be active in plasma membrane. Is expressed in embryonic head epidermis; larval visceral muscle cell; and visceral muscle primordium. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG33253 in Genome Data Viewer
    Location:
    18A5-18A6; 1-62 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (19183421..19187278)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (19077454..19081311)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Mec2 Neighboring gene Heterochromatin Protein 1D3 chromoshadow domain

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Systematic assessment of transcriptomic and metabolic reprogramming by blue light exposure coupled with aging. Huang J, et al. PNAS Nexus, 2023 Dec. PMID 38059264, Free PMC Article
    2. A high throughput screen to identify secreted and transmembrane proteins involved in Drosophila embryogenesis. Kopczynski CC, et al. Proc Natl Acad Sci U S A, 1998 Aug 18. PMID 9707585, Free PMC Article
    3. A computational and experimental approach to validating annotations and gene predictions in the Drosophila melanogaster genome. Yandell M, et al. Proc Natl Acad Sci U S A, 2005 Feb 1. PMID 15668397, Free PMC Article
    4. Global analysis of patterns of gene expression during Drosophila embryogenesis. Tomancak P, et al. Genome Biol, 2007. PMID 17645804, Free PMC Article
    5. Functional dissection of an innate immune response by a genome-wide RNAi screen. Foley E, et al. PLoS Biol, 2004 Aug. PMID 15221030, Free PMC Article

    See all (30) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG33253-PA
    CG33253-PB
    CG33253-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      19183421..19187278
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_206789.2 → NP_996512.1  uncharacterized protein Dmel_CG33253, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_996512.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MZ13
      Conserved Domains (2) summary
      smart00244
      Location:92 → 239
      PHB; prohibitin homologues
      cd13435
      Location:112 → 319
      SPFH_SLP-4; Slipin-4 (SLP-4), an uncharacterized subgroup of the stomatin-like proteins (slipins) family; belonging to the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily

    2. NM_001272770.2 → NP_001259699.1  uncharacterized protein Dmel_CG33253, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259699.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PI06
      Conserved Domains (2) summary
      smart00244
      Location:92 → 239
      PHB; prohibitin homologues
      cd13435
      Location:112 → 319
      SPFH_SLP-4; Slipin-4 (SLP-4), an uncharacterized subgroup of the stomatin-like proteins (slipins) family; belonging to the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily

    3. NM_001298499.1 → NP_001285428.1  uncharacterized protein Dmel_CG33253, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285428.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      X2JFR0
      Conserved Domains (2) summary
      smart00244
      Location:27 → 174
      PHB; prohibitin homologues
      cd13435
      Location:47 → 254
      SPFH_SLP-4; Slipin-4 (SLP-4), an uncharacterized subgroup of the stomatin-like proteins (slipins) family; belonging to the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PI06 M9PI06
    Q8MZ13 Q8MZ13
    X2JFR0 X2JFR0

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