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    PCHAS_0404400 elongation factor (EF-TS), putative [ Plasmodium chabaudi chabaudi ]

    Gene ID: 3496593, updated on 17-May-2024

    Summary

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    Gene symbol
    PCHAS_0404400
    Gene description
    elongation factor (EF-TS), putative
    Locus tag
    PCHAS_0404400
    See related
    PlasmoDB:PCHAS_0404400; VEuPathDB:PCHAS_0404400
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium chabaudi chabaudi (strain: AS, sub-species: chabaudi)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Vinckeia)
    Old locus tag
    PCHAS_040440
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_030104.2 (166703..167991, complement)

    Chromosome 4 - NC_030104.2Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium membrane protein, unknown function Neighboring gene conserved protein, unknown function Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene conserved Plasmodium protein, unknown function

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_030104.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A comprehensive evaluation of rodent malaria parasite genomes and gene expression. Otto TD, et al. BMC Biol, 2014 Oct 30. PMID 25359557, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation elongation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial translational elongation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    elongation factor (EF-TS), putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_030104.2 Reference assembly

      Range
      166703..167991 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_738396.1 → XP_743489.1  elongation factor (EF-TS), putative [Plasmodium chabaudi chabaudi]

      See identical proteins and their annotated locations for XP_743489.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      A0A077TJ76, Q4XUG7
      UniProtKB/TrEMBL
      A0A1D3LBS0
      Conserved Domains (1) summary
      PRK09377
      Location:61 → 375
      tsf; elongation factor Ts; Provisional
    Nucleotide Protein
    Heading Accession and Version

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