U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    CCDC88C coiled-coil domain containing 88C [ Mandrillus leucophaeus (drill) ]

    Gene ID: 105548006, updated on 13-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    CCDC88C
    Gene description
    coiled-coil domain containing 88C
    See related
    Ensembl:ENSMLEG00000040281
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mandrillus leucophaeus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Mandrillus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CCDC88C in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    32
    Annotation release Status Assembly Chr Location
    100 current Mleu.le_1.0 (GCF_000951045.1) Unplaced Scaffold NW_012104253.1 (13495783..13647582)

    NW_012104253.1Genomic Context describing neighboring genes Neighboring gene cation channel sperm associated auxiliary subunit beta Neighboring gene protein phosphatase 4 regulatory subunit 3A Neighboring gene G protein-coupled receptor 68 Neighboring gene D-glutamate cyclase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_012104253.1 Unplaced Scaffold Reference Mleu.le_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables dynein light intermediate chain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic microtubule organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cytoskeleton-dependent intracellular transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein Daple

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Mandrillus leucophaeus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mleu.le_1.0

    Genomic

    1. NW_012104253.1 Reference Mleu.le_1.0

      Range
      13495783..13647582
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011991814.1 → XP_011847204.1  protein Daple

      UniProtKB/TrEMBL
      A0A2K5ZWH3
      Related
      ENSMLEP00000032161.1, ENSMLET00000055738.1
      Conserved Domains (2) summary
      pfam01576
      Location:432 → 1422
      Myosin_tail_1; Myosin tail
      cl23720
      Location:592 → 704
      RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.