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    SNX19 sorting nexin 19 [ Microcebus murinus (gray mouse lemur) ]

    Gene ID: 105874807, updated on 13-Mar-2024

    Summary

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    Gene symbol
    SNX19
    Gene description
    sorting nexin 19
    See related
    Ensembl:ENSMICG00000004802
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Microcebus murinus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
    Orthologs
    human mouse all
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    Genomic context

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    See SNX19 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    101 current Mmur_3.0 (GCF_000165445.2) 5 NC_033664.1 (108535212..108574136, complement)
    100 previous assembly Mmur_2.0 (GCF_000165445.1) Unplaced Scaffold NW_012196432.1 (183184..222108)

    Chromosome 5 - NC_033664.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109730749 Neighboring gene 39S ribosomal protein L48, mitochondrial pseudogene Neighboring gene long-chain-fatty-acid--CoA ligase 4 pseudogene Neighboring gene uncharacterized LOC105874806

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in early endosome membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sorting nexin-19

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Microcebus murinus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmur_3.0 Primary Assembly

    Genomic

    1. NC_033664.1 Reference Mmur_3.0 Primary Assembly

      Range
      108535212..108574136 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012770933.1 → XP_012626387.1  sorting nexin-19 isoform X1

      UniProtKB/TrEMBL
      A0A8C5URU7, A0A8C5YHY8
      Related
      ENSMICP00000004376.2, ENSMICT00000004803.3
      Conserved Domains (3) summary
      cd06893
      Location:540 → 667
      PX_SNX19; The phosphoinositide binding Phox Homology domain of Sorting Nexin 19
      smart00313
      Location:95 → 273
      PXA; Domain associated with PX domains
      pfam08628
      Location:853 → 953
      Nexin_C; Sorting nexin C terminal

    2. XM_020286774.1 → XP_020142363.1  sorting nexin-19 isoform X2

      UniProtKB/TrEMBL
      A0A8B7X5C4, A0A8C5YHY8
      Related
      ENSMICP00000050489.1, ENSMICT00000060085.1
      Conserved Domains (2) summary
      cd06893
      Location:540 → 667
      PX_SNX19; The phosphoinositide binding Phox Homology domain of Sorting Nexin 19
      smart00313
      Location:95 → 273
      PXA; Domain associated with PX domains
    Nucleotide Protein
    Heading Accession and Version

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