U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    Ppp1r3c protein phosphatase 1, regulatory subunit 3C [ Mus musculus (house mouse) ]

    Gene ID: 53412, updated on 9-Dec-2024

    Summary

    Official Symbol
    Ppp1r3cprovided by MGI
    Official Full Name
    protein phosphatase 1, regulatory subunit 3Cprovided by MGI
    Primary source
    MGI:MGI:1858229
    See related
    Ensembl:ENSMUSG00000067279 AllianceGenome:MGI:1858229
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    PTG; Ppp1r5
    Summary
    Enables glycogen binding activity; molecular adaptor activity; and protein phosphatase binding activity. Involved in glycogen biosynthetic process. Acts upstream of or within glycogen metabolic process. Is active in cytosol. Is expressed in genitourinary system; liver; and nasal capsule. Used to study type 2 diabetes mellitus. Orthologous to human PPP1R3C (protein phosphatase 1 regulatory subunit 3C). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Broad expression in heart adult (RPKM 24.0), liver E18 (RPKM 21.6) and 18 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Ppp1r3c in Genome Data Viewer
    Location:
    19 C2; 19 31.89 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (36709131..36714004, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (36731731..36736604, complement)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 41838 Neighboring gene HECT domain E3 ubiquitin protein ligase 2 Neighboring gene STARR-seq mESC enhancer starr_46028 Neighboring gene Hectd2, opposite strand Neighboring gene STARR-seq mESC enhancer starr_46029 Neighboring gene STARR-seq mESC enhancer starr_46030 Neighboring gene predicted gene, 57662 Neighboring gene tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 Neighboring gene STARR-seq mESC enhancer starr_46034

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (4)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables [phosphorylase] phosphatase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables enzyme binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables glycogen binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables glycogen binding IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    enables molecular adaptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables molecular adaptor activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    contributes_to phosphoprotein phosphatase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein phosphatase 1 binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein phosphatase binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in glycogen granule ISO
    Inferred from Sequence Orthology
    more info
     
    part_of protein phosphatase type 1 complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    protein phosphatase 1 regulatory subunit 3C
    Names
    PP1 subunit R5
    protein phosphatase 1 binding protein PTG
    protein phosphatase 1 regulatory subunit 5
    protein phosphatase 1, regulatory (inhibitor) subunit 3C
    protein phosphatase 1, regulatory (inhibitor) subunit 5
    protein targeting to glicogen
    protein targeting to glycogen

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_016854.2NP_058550.1  protein phosphatase 1 regulatory subunit 3C

      See identical proteins and their annotated locations for NP_058550.1

      Status: VALIDATED

      Source sequence(s)
      BC054739
      Consensus CDS
      CCDS37968.1
      UniProtKB/Swiss-Prot
      O08541, Q7TMB3, Q8BJW8
      Related
      ENSMUSP00000084578.3, ENSMUST00000087321.4
      Conserved Domains (1) summary
      pfam03370
      Location:151256
      CBM_21; Carbohydrate/starch-binding module (family 21)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      36709131..36714004 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)