U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    LmxM_08_1040c_1 hypothetical protein [ Leishmania mexicana MHOM/GT/2001/U1103 ]

    Gene ID: 13451359, updated on 28-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LmxM_08_1040c_1
    Gene description
    hypothetical protein
    Locus tag
    LmxM_08_1040c_1
    Gene type
    protein coding
    RNA name
    uncharacterized protein
    RefSeq status
    PROVISIONAL
    Organism
    Leishmania mexicana MHOM/GT/2001/U1103 (strain: MHOM/GT/2001/U1103)
    Lineage
    Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LmxM_08_1040c_1 in Genome Data Viewer
    Exon count:
    1

    NW_003946411.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_003946411.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis involved in protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003946411.1 Reference assembly

      Range
      1..998 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003886523.2 → XP_003886572.1  uncharacterized protein, partial [Leishmania mexicana MHOM/GT/2001/U1103]

      See identical proteins and their annotated locations for XP_003886572.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      E8NHH6, P92185
      Conserved Domains (3) summary
      PTZ00203
      Location:1 → 332
      PTZ00203; cathepsin L protease; Provisional
      smart00848
      Location:38 → 93
      Inhibitor_I29; Cathepsin propeptide inhibitor domain (I29)
      pfam00112
      Location:126 → 327
      Peptidase_C1; Papain family cysteine protease
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases