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    nlk2 nemo-like kinase, type 2 [ Takifugu rubripes (torafugu) ]

    Gene ID: 445934, updated on 5-Mar-2024

    Summary

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    Gene symbol
    nlk2
    Gene description
    nemo-like kinase, type 2
    See related
    Ensembl:ENSTRUG00000006607
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Takifugu rubripes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
    Also known as
    nlk
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human zebrafish all
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    Genomic context

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    See nlk2 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current fTakRub1.2 (GCF_901000725.2) 11 NC_042295.1 (687332..692882, complement)
    101 previous assembly FUGU5 (GCF_000180615.1) Unplaced Scaffold NW_004071190.1 (138986..144470)

    Chromosome 11 - NC_042295.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115251534 Neighboring gene Na(+)/H(+) exchange regulatory cofactor NHE-RF3-like Neighboring gene single-pass membrane protein with coiled-coil domains 4 Neighboring gene neurofibromin 1a Neighboring gene salivary glue protein Sgs-3-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of the Fugu rubripes NLK and FN5 genes flanking the NF1 (Neurofibromatosis type 1) gene in the 5' direction and mapping of the human counterparts. Kehrer-Sawatzki H, et al. Gene, 2000 Jun 13. PMID 10863097
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables MAP kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/threonine-protein kinase NLK
    Names
    nemo like kinase
    NP_001027920.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001032748.1 → NP_001027920.1  serine/threonine-protein kinase NLK

      See identical proteins and their annotated locations for NP_001027920.1

      Status: PROVISIONAL

      Source sequence(s)
      AF197138
      UniProtKB/TrEMBL
      H2SV00, Q9I863
      Related
      ENSTRUP00000016238.3, ENSTRUT00000016310.3
      Conserved Domains (2) summary
      cd07853
      Location:53 → 424
      STKc_NLK; Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase
      smart00220
      Location:55 → 343
      S_TKc; Serine/Threonine protein kinases, catalytic domain

    RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fTakRub1.2 Primary Assembly

    Genomic

    1. NC_042295.1 Reference fTakRub1.2 Primary Assembly

      Range
      687332..692882 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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