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    SLC38A7 solute carrier family 38 member 7 [ Calidris pugnax (ruff) ]

    Gene ID: 106892154, updated on 3-Aug-2024

    Summary

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    Gene symbol
    SLC38A7
    Gene description
    solute carrier family 38 member 7
    See related
    Ensembl:ENSCPUG00000010617
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Calidris pugnax
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Calidris
    Orthologs
    human mouse all
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    Genomic context

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    See SLC38A7 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    100 current ASM143184v1 (GCF_001431845.1) Unplaced Scaffold NW_015090776.1 (5340856..5349246, complement)

    NW_015090776.1Genomic Context describing neighboring genes Neighboring gene SET domain containing 6, protein lysine methyltransferase Neighboring gene CCR4-NOT transcription complex subunit 1 Neighboring gene glutamic-oxaloacetic transaminase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015090776.1 Unplaced Scaffold Reference ASM143184v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-alanine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables L-asparagine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables L-aspartate transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables L-glutamate transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables L-glutamine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables L-histidine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables L-leucine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables L-methionine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables L-serine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in amino acid transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative sodium-coupled neutral amino acid transporter 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Calidris pugnax Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM143184v1

    Genomic

    1. NW_015090776.1 Reference ASM143184v1

      Range
      5340856..5349246 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014949136.1 → XP_014804622.1  putative sodium-coupled neutral amino acid transporter 7

      Related
      ENSCPUP00000015229.1, ENSCPUT00000018063.1
      Conserved Domains (1) summary
      cl00456
      Location:50 → 457
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    2. XM_014949146.1 → XP_014804632.1  putative sodium-coupled neutral amino acid transporter 7

      Related
      ENSCPUP00000015230.1, ENSCPUT00000018064.1
      Conserved Domains (1) summary
      cl00456
      Location:50 → 457
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
    Nucleotide Protein
    Heading Accession and Version

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