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    LOC107059588 protein SIEVE ELEMENT OCCLUSION C [ Solanum tuberosum (potato) ]

    Gene ID: 107059588, updated on 2-Nov-2023

    Summary

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    Gene symbol
    LOC107059588
    Gene description
    protein SIEVE ELEMENT OCCLUSION C
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solanum tuberosum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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    Genomic context

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    See LOC107059588 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006238953.1 (2790198..2793422)

    NW_006238953.1Genomic Context describing neighboring genes Neighboring gene protein SIEVE ELEMENT OCCLUSION B-like Neighboring gene uncharacterized LOC107059608 Neighboring gene protein SIEVE ELEMENT OCCLUSION B-like Neighboring gene keratin, type II cytoskeletal I-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006238953.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in phloem development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein SIEVE ELEMENT OCCLUSION C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SolTub_3.0 Primary Assembly

    Genomic

    1. NW_006238953.1 Reference SolTub_3.0 Primary Assembly

      Range
      2790198..2793422
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015306284.1 → XP_015161770.1  protein SIEVE ELEMENT OCCLUSION C

      Conserved Domains (2) summary
      pfam14577
      Location:182 → 412
      SEO_C; Sieve element occlusion C-terminus
      cl00388
      Location:85 → 179
      Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold
    Nucleotide Protein
    Heading Accession and Version

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