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    LOC107125504 interferon-induced protein with tetratricopeptide repeats 5-like [ Gekko japonicus ]

    Gene ID: 107125504, updated on 2-Nov-2023

    Summary

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    Gene symbol
    LOC107125504
    Gene description
    interferon-induced protein with tetratricopeptide repeats 5-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gekko japonicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Gekkonidae; Gekkoninae; Gekko
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

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    See LOC107125504 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current Gekko_japonicus_V1.1 (GCF_001447785.1) Unplaced Scaffold NW_015291977.1 (10..298, complement)

    NW_015291977.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015291977.1 Unplaced Scaffold Reference Gekko_japonicus_V1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in defense response to virus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    interferon-induced protein with tetratricopeptide repeats 5-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gekko japonicus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Gekko_japonicus_V1.1 Primary Assembly

    Genomic

    1. NW_015291977.1 Reference Gekko_japonicus_V1.1 Primary Assembly

      Range
      10..298 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015428923.1 → XP_015284409.1  interferon-induced protein with tetratricopeptide repeats 5-like

    Nucleotide Protein
    Heading Accession and Version

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