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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_023205.2 RefSeqGene
- Range
-
13949..21546
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001080156.3 → NP_001073625.1 rho GTPase-activating protein 9 isoform 3
See identical proteins and their annotated locations for NP_001073625.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, lacks a portion of the 5' coding region, initiates translation at a downstream start codon, compared to variant 1. The resulting isoform (3) has a shorter N-terminus compared to isoform 1. Variants 3 and 11 both encode the same isoform (3).
- Source sequence(s)
-
AB030239, CB528354, DC390315
- Consensus CDS
-
CCDS44928.1
- UniProtKB/Swiss-Prot
-
Q9BRR9
- Related
- ENSP00000397950.2, ENST00000430041.6
- Conserved Domains (4) summary
-
- cd04403
Location:337 → 541
- RhoGAP_ARHGAP27_15_12_9; RhoGAP_ARHGAP27_15_12_9: GTPase-activator protein (GAP) domain for Rho-like GTPases found in ARHGAP27 (also called CAMGAP1), ARHGAP15, 12 and 9-like proteins; This subgroup of ARHGAPs are multidomain proteins that contain RhoGAP, PH, SH3 and WW domains. ...
- cd13233
Location:140 → 252
- PH_ARHGAP9-like; Beta-spectrin pleckstrin homology (PH) domain
- pfam00169
Location:139 → 251
- PH; PH domain
- pfam00397
Location:35 → 61
- WW; WW domain
-
NM_001080157.2 → NP_001073626.1 rho GTPase-activating protein 9 isoform 2
See identical proteins and their annotated locations for NP_001073626.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and lacks an alternate exon in the 3' coding region, which results in a frameshift, compared to variant 1. The resulting isoform (2) is shorter and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AB030239, AK092763
- Consensus CDS
-
CCDS44929.1
- UniProtKB/TrEMBL
-
R4GN15
- Related
- ENSP00000394307.2, ENST00000424809.6
- Conserved Domains (4) summary
-
- cd13233
Location:324 → 436
- PH_ARHGAP9-like; Beta-spectrin pleckstrin homology (PH) domain
- pfam00169
Location:323 → 435
- PH; PH domain
- cl02570
Location:521 → 639
- RhoGAP; RhoGAP: GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when ...
- cl17036
Location:26 → 82
- SH3; Src Homology 3 domain superfamily
-
NM_001319850.2 → NP_001306779.2 rho GTPase-activating protein 9 isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR, initiates translation at an alternate start codon and contains multiple additional 5' coding exons, and uses an alternate in-frame splice site in the central coding region, compared to variant 1. The encoded isoform (4) has a longer N-terminus and is longer, compared to isoform 1.
- Source sequence(s)
-
AC022506, BC006107
- Consensus CDS
-
CCDS81705.2
- UniProtKB/Swiss-Prot
- B4DVI3, E9PDX9, Q8NAF3, Q8TCJ3, Q8WYR0, Q96EZ2, Q96S74, Q9BRR9
- UniProtKB/TrEMBL
-
A0A2X0SF68
- Related
- ENSP00000377386.3, ENST00000393797.7
-
NM_001319851.2 → NP_001306780.1 rho GTPase-activating protein 9 isoform 5
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR, lacks a portion and contains an alternate segment in the 5' coding region, and uses an alternate in-frame splice site in the central coding region, compared to variant 1. It initiates translation at a downstream start codon. The encoded isoform (5) has a shorter N-terminus and is shorter, compared to isoform 1.
- Source sequence(s)
-
AC022506
- UniProtKB/TrEMBL
-
B3KQ74
- Related
-
ENST00000546200.5
- Conserved Domains (3) summary
-
- cd04403
Location:210 → 414
- RhoGAP_ARHGAP27_15_12_9; RhoGAP_ARHGAP27_15_12_9: GTPase-activator protein (GAP) domain for Rho-like GTPases found in ARHGAP27 (also called CAMGAP1), ARHGAP15, 12 and 9-like proteins; This subgroup of ARHGAPs are multidomain proteins that contain RhoGAP, PH, SH3 and WW domains. ...
- cd13233
Location:1 → 106
- PH_ARHGAP9-like; Beta-spectrin pleckstrin homology (PH) domain
- pfam00169
Location:8 → 105
- PH; PH domain
-
NM_001319852.2 → NP_001306781.1 rho GTPase-activating protein 9 isoform 6
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR, lacks a portion of the 5' coding region, initiates translation at a downstream start codon, and uses an alternate in-frame splice site in the central coding region, compared to variant 1. The encoded isoform (6) has a shorter N-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AC022506
- UniProtKB/Swiss-Prot
-
Q9BRR9
- Conserved Domains (4) summary
-
- cd04403
Location:356 → 560
- RhoGAP_ARHGAP27_15_12_9; RhoGAP_ARHGAP27_15_12_9: GTPase-activator protein (GAP) domain for Rho-like GTPases found in ARHGAP27 (also called CAMGAP1), ARHGAP15, 12 and 9-like proteins; This subgroup of ARHGAPs are multidomain proteins that contain RhoGAP, PH, SH3 and WW domains. ...
- cd13233
Location:140 → 252
- PH_ARHGAP9-like; Beta-spectrin pleckstrin homology (PH) domain
- pfam00169
Location:139 → 251
- PH; PH domain
- pfam00397
Location:35 → 61
- WW; WW domain
-
NM_001367422.1 → NP_001354351.1 rho GTPase-activating protein 9 isoform 7
Status: REVIEWED
- Source sequence(s)
-
AC022506
-
NM_001367423.1 → NP_001354352.1 rho GTPase-activating protein 9 isoform 8
Status: REVIEWED
- Source sequence(s)
-
AC022506
-
NM_001367424.1 → NP_001354353.1 rho GTPase-activating protein 9 isoform 9
Status: REVIEWED
- Source sequence(s)
-
AC022506
-
NM_001367425.1 → NP_001354354.1 rho GTPase-activating protein 9 isoform 10
Status: REVIEWED
- Source sequence(s)
-
AC022506
-
NM_001367426.1 → NP_001354355.1 rho GTPase-activating protein 9 isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (11), as well as variant 3, encodes isoform 3.
- Source sequence(s)
-
AC022506
- Consensus CDS
-
CCDS44928.1
-
NM_032496.4 → NP_115885.2 rho GTPase-activating protein 9 isoform 1
See identical proteins and their annotated locations for NP_115885.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes isoform 1.
- Source sequence(s)
-
AB051853, DC408597
- Consensus CDS
-
CCDS8941.2
- UniProtKB/TrEMBL
-
A0A2X0SF68
- Related
- ENSP00000377380.3, ENST00000393791.8
- Conserved Domains (5) summary
-
- cd12143
Location:26 → 82
- SH3_ARHGAP9; Src Homology 3 domain of Rho GTPase-activating protein 9 and similar proteins
- cd04403
Location:521 → 725
- RhoGAP_ARHGAP27_15_12_9; RhoGAP_ARHGAP27_15_12_9: GTPase-activator protein (GAP) domain for Rho-like GTPases found in ARHGAP27 (also called CAMGAP1), ARHGAP15, 12 and 9-like proteins; This subgroup of ARHGAPs are multidomain proteins that contain RhoGAP, PH, SH3 and WW domains. ...
- cd13233
Location:324 → 436
- PH_ARHGAP9-like; Beta-spectrin pleckstrin homology (PH) domain
- pfam00169
Location:323 → 435
- PH; PH domain
- pfam00397
Location:219 → 245
- WW; WW domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000012.12 Reference GRCh38.p14 Primary Assembly
- Range
-
57472269..57488824 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047429331.1 → XP_047285287.1 rho GTPase-activating protein 9 isoform X3
- UniProtKB/Swiss-Prot
- B4DVI3, E9PDX9, Q8NAF3, Q8TCJ3, Q8WYR0, Q96EZ2, Q96S74, Q9BRR9
- UniProtKB/TrEMBL
-
A0A2X0SF68
-
XM_047429334.1 → XP_047285290.1 rho GTPase-activating protein 9 isoform X5
- UniProtKB/TrEMBL
-
R4GN15
-
XM_047429329.1 → XP_047285285.1 rho GTPase-activating protein 9 isoform X2
- UniProtKB/TrEMBL
-
A0A2X0SF68
-
XM_047429330.1 → XP_047285286.1 rho GTPase-activating protein 9 isoform X3
- UniProtKB/Swiss-Prot
- B4DVI3, E9PDX9, Q8NAF3, Q8TCJ3, Q8WYR0, Q96EZ2, Q96S74, Q9BRR9
- UniProtKB/TrEMBL
-
A0A2X0SF68
-
XM_011538659.3 → XP_011536961.1 rho GTPase-activating protein 9 isoform X4
See identical proteins and their annotated locations for XP_011536961.1
- UniProtKB/TrEMBL
-
R4GN15
- Related
- ENSP00000473445.2, ENST00000550288.6
- Conserved Domains (4) summary
-
- cd13233
Location:324 → 436
- PH_ARHGAP9-like; Beta-spectrin pleckstrin homology (PH) domain
- pfam00169
Location:323 → 435
- PH; PH domain
- cl02570
Location:521 → 639
- RhoGAP; RhoGAP: GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when ...
- cl17036
Location:26 → 82
- SH3; Src Homology 3 domain superfamily
-
XM_011538656.3 → XP_011536958.1 rho GTPase-activating protein 9 isoform X1
See identical proteins and their annotated locations for XP_011536958.1
- UniProtKB/TrEMBL
-
A0A2X0SF68
- Conserved Domains (5) summary
-
- cd12143
Location:26 → 82
- SH3_ARHGAP9; Src Homology 3 domain of Rho GTPase-activating protein 9 and similar proteins
- cd04403
Location:521 → 725
- RhoGAP_ARHGAP27_15_12_9; RhoGAP_ARHGAP27_15_12_9: GTPase-activator protein (GAP) domain for Rho-like GTPases found in ARHGAP27 (also called CAMGAP1), ARHGAP15, 12 and 9-like proteins; This subgroup of ARHGAPs are multidomain proteins that contain RhoGAP, PH, SH3 and WW domains. ...
- cd13233
Location:324 → 436
- PH_ARHGAP9-like; Beta-spectrin pleckstrin homology (PH) domain
- pfam00169
Location:323 → 435
- PH; PH domain
- pfam00397
Location:219 → 245
- WW; WW domain
-
XM_047429333.1 → XP_047285289.1 rho GTPase-activating protein 9 isoform X1
- UniProtKB/TrEMBL
-
A0A2X0SF68
-
XM_047429332.1 → XP_047285288.1 rho GTPase-activating protein 9 isoform X1
- UniProtKB/TrEMBL
-
A0A2X0SF68
-
XM_047429335.1 → XP_047285291.1 rho GTPase-activating protein 9 isoform X6
- UniProtKB/TrEMBL
-
R4GN15
-
XM_047429337.1 → XP_047285293.1 rho GTPase-activating protein 9 isoform X8
-
XM_047429336.1 → XP_047285292.1 rho GTPase-activating protein 9 isoform X7
-
XM_047429340.1 → XP_047285296.1 rho GTPase-activating protein 9 isoform X11
-
XM_005269083.3 → XP_005269140.1 rho GTPase-activating protein 9 isoform X7
See identical proteins and their annotated locations for XP_005269140.1
- UniProtKB/Swiss-Prot
-
Q9BRR9
- Conserved Domains (4) summary
-
- cd04403
Location:356 → 560
- RhoGAP_ARHGAP27_15_12_9; RhoGAP_ARHGAP27_15_12_9: GTPase-activator protein (GAP) domain for Rho-like GTPases found in ARHGAP27 (also called CAMGAP1), ARHGAP15, 12 and 9-like proteins; This subgroup of ARHGAPs are multidomain proteins that contain RhoGAP, PH, SH3 and WW domains. ...
- cd13233
Location:140 → 252
- PH_ARHGAP9-like; Beta-spectrin pleckstrin homology (PH) domain
- pfam00169
Location:139 → 251
- PH; PH domain
- pfam00397
Location:35 → 61
- WW; WW domain
-
XM_047429339.1 → XP_047285295.1 rho GTPase-activating protein 9 isoform X10
-
XM_047429338.1 → XP_047285294.1 rho GTPase-activating protein 9 isoform X9
Alternate T2T-CHM13v2.0
Genomic
-
NC_060936.1 Alternate T2T-CHM13v2.0
- Range
-
57440558..57457116 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054372872.1 → XP_054228847.1 rho GTPase-activating protein 9 isoform X5
- UniProtKB/TrEMBL
-
R4GN15
-
XM_054372868.1 → XP_054228843.1 rho GTPase-activating protein 9 isoform X3
- UniProtKB/TrEMBL
-
A0A2X0SF68
-
XM_054372871.1 → XP_054228846.1 rho GTPase-activating protein 9 isoform X4
- UniProtKB/TrEMBL
-
R4GN15
-
XM_054372867.1 → XP_054228842.1 rho GTPase-activating protein 9 isoform X1
- UniProtKB/TrEMBL
-
A0A2X0SF68
-
XM_054372870.1 → XP_054228845.1 rho GTPase-activating protein 9 isoform X1
- UniProtKB/TrEMBL
-
A0A2X0SF68
-
XM_054372869.1 → XP_054228844.1 rho GTPase-activating protein 9 isoform X1
- UniProtKB/TrEMBL
-
A0A2X0SF68
-
XM_054372873.1 → XP_054228848.1 rho GTPase-activating protein 9 isoform X6
- UniProtKB/TrEMBL
-
R4GN15
-
XM_054372875.1 → XP_054228850.1 rho GTPase-activating protein 9 isoform X7
-
XM_054372876.1 → XP_054228851.1 rho GTPase-activating protein 9 isoform X8
-
XM_054372879.1 → XP_054228854.1 rho GTPase-activating protein 9 isoform X11
-
XM_054372874.1 → XP_054228849.1 rho GTPase-activating protein 9 isoform X7
-
XM_054372877.1 → XP_054228852.1 rho GTPase-activating protein 9 isoform X12
-
XM_054372878.1 → XP_054228853.1 rho GTPase-activating protein 9 isoform X13