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    ASB12 ankyrin repeat and SOCS box containing 12 [ Bos taurus (domestic cattle) ]

    Gene ID: 539344, updated on 1-Jan-2025

    Summary

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    Official Symbol
    ASB12provided by VGNC
    Official Full Name
    ankyrin repeat and SOCS box containing 12provided by VGNC
    Primary source
    VGNC:VGNC:26189
    See related
    BGD:BT29307; Ensembl:ENSBTAG00000007211
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
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    Genomic context

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    See ASB12 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) X NC_037357.1 (96058929..96104560)

    Chromosome X - NC_037357.1Genomic Context describing neighboring genes Neighboring gene myotubularin related protein 8 Neighboring gene small integral membrane protein 13 Neighboring gene NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial pseudogene Neighboring gene APC membrane recruitment protein 1 Neighboring gene Cdc42 guanine nucleotide exchange factor 9 Neighboring gene microRNA mir-1468

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037357.1 Chromosome X Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC151979

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA nuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ankyrin repeat and SOCS box protein 12
    Names
    ankyrin repeat and SOCS box-containing protein 12
    NP_001179154.1
    XP_059739483.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001192225.3 → NP_001179154.1  ankyrin repeat and SOCS box protein 12

      See identical proteins and their annotated locations for NP_001179154.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000030
      UniProtKB/TrEMBL
      F5B2W0
      Related
      ENSBTAP00000009484.6, ENSBTAT00000009484.7
      Conserved Domains (4) summary
      cd00204
      Location:62 → 188
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:62 → 90
      ANK; ANK repeat [structural motif]
      pfam07525
      Location:264 → 302
      SOCS_box; SOCS box
      pfam12796
      Location:2 → 90
      Ank_2; Ankyrin repeats (3 copies)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037357.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      96058929..96104560
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059883500.1 → XP_059739483.1  ankyrin repeat and SOCS box protein 12 isoform X1

      UniProtKB/TrEMBL
      F5B2W0
    Nucleotide Protein Strain
    Heading Accession and Version

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