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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001003683.3 → NP_001003683.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform 2
See identical proteins and their annotated locations for NP_001003683.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' and 3' UTRs, compared to variant 1. The encoded isoform (2) is shorter and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC010888, AC011291, AC012500
- Consensus CDS
-
CCDS33344.1
- UniProtKB/Swiss-Prot
- D3DPG5, P54750, Q86VZ0, Q9C0K8, Q9C0K9, Q9C0L0, Q9C0L1, Q9C0L2, Q9C0L3, Q9C0L4, Q9UFX3
- UniProtKB/TrEMBL
-
B7Z226
- Related
- ENSP00000387037.1, ENST00000410103.2
- Conserved Domains (2) summary
-
- pfam00233
Location:218 → 434
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:77 → 133
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
-
NM_001258312.3 → NP_001245241.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and uses an alternate start codon, compared to variant 1. The encoded isoform (3) is longer and has a distinct N-terminus, compared to isoform 1.
- Source sequence(s)
-
AC010888, AC011291, AC012500
- UniProtKB/TrEMBL
-
B7Z226
- Conserved Domains (2) summary
-
- pfam00233
Location:222 → 438
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:81 → 137
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
-
NM_001258313.3 → NP_001245242.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform 4
See identical proteins and their annotated locations for NP_001245242.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' and 3' UTRs and uses an alternate start codon, compared to variant 1. The encoded isoform (4) is shorter and has distinct N- and C-termini, compared to isoform 1.
- Source sequence(s)
-
AC010888, AC011291, AC012500
- Consensus CDS
-
CCDS58741.1
- UniProtKB/TrEMBL
-
B7Z226
- Related
- ENSP00000309269.9, ENST00000351439.10
- Conserved Domains (2) summary
-
- pfam00233
Location:202 → 418
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:61 → 117
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
-
NM_001258314.3 → NP_001245243.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform 5
See identical proteins and their annotated locations for NP_001245243.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) differs in the 5' and 3' UTRs and uses an alternate start codon, compared to variant 1. The encoded isoform (5) is shorter and has distinct N- and C-termini, compared to isoform 1.
- Source sequence(s)
-
AC011291
- Consensus CDS
-
CCDS74612.1
- UniProtKB/TrEMBL
-
B7Z7A2
- Related
- ENSP00000350858.3, ENST00000358139.6
- Conserved Domains (2) summary
-
- pfam00233
Location:184 → 400
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:43 → 99
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
-
NM_001363871.4 → NP_001350800.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform 6
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR and uses an alternate start codon, compared to variant 1. The encoded isoform (6) is shorter and has distinct N- terminus, compared to isoform 1.
- Source sequence(s)
-
AC010888, AC011291, AC012500
- Consensus CDS
-
CCDS86900.1
- UniProtKB/TrEMBL
-
B7Z226
- Related
- ENSP00000386767.1, ENST00000409365.6
- Conserved Domains (2) summary
-
- pfam00233
Location:202 → 418
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:61 → 117
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
-
NM_001395258.2 → NP_001382187.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform 1
Status: VALIDATED
- Source sequence(s)
-
AC010888, AC011291, AC012500
- Consensus CDS
-
CCDS2285.1
- UniProtKB/TrEMBL
-
B7Z226
- Conserved Domains (2) summary
-
- pfam00233
Location:218 → 434
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:77 → 133
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
-
NM_001395259.2 → NP_001382188.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform 1
Status: VALIDATED
- Source sequence(s)
-
AC010888, AC011291, AC012500
- Consensus CDS
-
CCDS2285.1
- UniProtKB/TrEMBL
-
B7Z226
- Related
- ENSP00000512257.1, ENST00000482782.6
- Conserved Domains (2) summary
-
- pfam00233
Location:218 → 434
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:77 → 133
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
-
NM_001395260.2 → NP_001382189.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform 1
Status: VALIDATED
- Source sequence(s)
-
AC010888, AC011291, AC012500
- Consensus CDS
-
CCDS2285.1
- UniProtKB/TrEMBL
-
B7Z226
- Conserved Domains (2) summary
-
- pfam00233
Location:218 → 434
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:77 → 133
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
-
NM_001395261.2 → NP_001382190.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform 1
Status: VALIDATED
- Source sequence(s)
-
AC010888, AC011291, AC012500
- Consensus CDS
-
CCDS2285.1
- UniProtKB/TrEMBL
-
B7Z226
- Conserved Domains (2) summary
-
- pfam00233
Location:218 → 434
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:77 → 133
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
-
NM_001395262.1 → NP_001382191.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC010888, AC011291, AC012500
- Consensus CDS
-
CCDS33344.1
- UniProtKB/Swiss-Prot
- D3DPG5, P54750, Q86VZ0, Q9C0K8, Q9C0K9, Q9C0L0, Q9C0L1, Q9C0L2, Q9C0L3, Q9C0L4, Q9UFX3
- UniProtKB/TrEMBL
-
B7Z226
- Related
- ENSP00000512258.1, ENST00000495511.2
- Conserved Domains (2) summary
-
- pfam00233
Location:218 → 434
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:77 → 133
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
-
NM_001395263.1 → NP_001382192.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC010888, AC011291, AC012500
- Consensus CDS
-
CCDS33344.1
- UniProtKB/Swiss-Prot
- D3DPG5, P54750, Q86VZ0, Q9C0K8, Q9C0K9, Q9C0L0, Q9C0L1, Q9C0L2, Q9C0L3, Q9C0L4, Q9UFX3
- UniProtKB/TrEMBL
-
B7Z226
- Conserved Domains (2) summary
-
- pfam00233
Location:218 → 434
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:77 → 133
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
-
NM_001395264.1 → NP_001382193.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform 7
Status: VALIDATED
- Source sequence(s)
-
AC010888, AC011291, AC012500
- UniProtKB/TrEMBL
-
B7Z226
- Conserved Domains (1) summary
-
- cd00077
Location:202 → 373
- HDc; Metal dependent phosphohydrolases with conserved 'HD' motif
-
NM_001395265.2 → NP_001382194.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform 8
Status: VALIDATED
- Source sequence(s)
-
AC010888, AC011291, AC012500
- UniProtKB/TrEMBL
- B7Z226, B7Z3A7
- Conserved Domains (2) summary
-
- pfam00233
Location:114 → 330
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:14 → 29
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
-
NM_001395266.1 → NP_001382195.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform 9
Status: VALIDATED
- Source sequence(s)
-
AC010888, AC011291, AC012500
- Conserved Domains (1) summary
-
- cd00077
Location:218 → 389
- HDc; Metal dependent phosphohydrolases with conserved 'HD' motif
-
NM_001395267.1 → NP_001382196.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform 9
Status: VALIDATED
- Source sequence(s)
-
AC010888, AC011291, AC012500
- Conserved Domains (1) summary
-
- cd00077
Location:218 → 389
- HDc; Metal dependent phosphohydrolases with conserved 'HD' motif
-
NM_001395268.1 → NP_001382197.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform 10
Status: VALIDATED
- Source sequence(s)
-
AC010888, AC011291, AC012500
- Conserved Domains (1) summary
-
- cd00077
Location:202 → 373
- HDc; Metal dependent phosphohydrolases with conserved 'HD' motif
-
NM_001395269.1 → NP_001382198.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform 11
Status: VALIDATED
- Source sequence(s)
-
AC011291
- Conserved Domains (1) summary
-
- cd00077
Location:184 → 355
- HDc; Metal dependent phosphohydrolases with conserved 'HD' motif
-
NM_005019.7 → NP_005010.2 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform 1
See identical proteins and their annotated locations for NP_005010.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes isoform 1.
- Source sequence(s)
-
AC010888, AC011291, AC012500
- Consensus CDS
-
CCDS2285.1
- UniProtKB/TrEMBL
-
B7Z226
- Related
- ENSP00000410309.1, ENST00000435564.6
- Conserved Domains (2) summary
-
- pfam00233
Location:218 → 434
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:77 → 133
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000002.12 Reference GRCh38.p14 Primary Assembly
- Range
-
182140041..182716797 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047444688.1 → XP_047300644.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform X4
- UniProtKB/TrEMBL
-
B7Z226
-
XM_011511326.3 → XP_011509628.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform X6
- UniProtKB/TrEMBL
-
B7Z7A2
- Conserved Domains (2) summary
-
- pfam00233
Location:184 → 400
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:43 → 99
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
-
XM_017004294.3 → XP_016859783.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform X2
- UniProtKB/TrEMBL
-
B7Z226
-
XM_011511323.3 → XP_011509625.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform X1
- UniProtKB/TrEMBL
-
B7Z226
- Conserved Domains (2) summary
-
- pfam00233
Location:218 → 434
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:77 → 133
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
-
XM_011511325.4 → XP_011509627.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform X5
- UniProtKB/TrEMBL
-
B7Z226
- Conserved Domains (2) summary
-
- pfam00233
Location:202 → 418
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:61 → 117
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
-
XM_011511324.4 → XP_011509626.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform X3
- UniProtKB/TrEMBL
-
B7Z226
- Conserved Domains (2) summary
-
- pfam00233
Location:218 → 434
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:77 → 133
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
RNA
-
XR_007076388.1 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060926.1 Alternate T2T-CHM13v2.0
- Range
-
182629098..183205733 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054342464.1 → XP_054198439.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform X4
- UniProtKB/TrEMBL
-
B7Z226
-
XM_054342466.1 → XP_054198441.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform X6
- UniProtKB/TrEMBL
-
B7Z7A2
-
XM_054342462.1 → XP_054198437.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform X2
- UniProtKB/TrEMBL
-
B7Z226
-
XM_054342461.1 → XP_054198436.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform X1
- UniProtKB/TrEMBL
-
B7Z226
-
XM_054342465.1 → XP_054198440.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform X5
- UniProtKB/TrEMBL
-
B7Z226
-
XM_054342463.1 → XP_054198438.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform X3
- UniProtKB/TrEMBL
-
B7Z226
RNA
-
XR_008486392.1 RNA Sequence