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    FSD2 fibronectin type III and SPRY domain containing 2 [ Coturnix japonica (Japanese quail) ]

    Gene ID: 107318729, updated on 14-Mar-2024

    Summary

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    Gene symbol
    FSD2
    Gene description
    fibronectin type III and SPRY domain containing 2
    See related
    Ensembl:ENSCJPG00005020212
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Coturnix japonica
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
    Orthologs
    human mouse all
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    Genomic context

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    See FSD2 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    101 current Coturnix japonica 2.1 (GCF_001577835.2) 10 NC_029525.1 (9832399..9851213, complement)

    Chromosome 10 - NC_029525.1Genomic Context describing neighboring genes Neighboring gene glycine amidinotransferase Neighboring gene phosphodiesterase 8A Neighboring gene small Cajal body-specific RNA 15 Neighboring gene WASP homolog associated with actin, golgi membranes and microtubules Neighboring gene homer scaffold protein 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_029525.1 Chromosome 10 Reference Coturnix japonica 2.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    fibronectin type III and SPRY domain-containing protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Coturnix japonica 2.1 Primary Assembly

    Genomic

    1. NC_029525.1 Reference Coturnix japonica 2.1 Primary Assembly

      Range
      9832399..9851213 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015872914.2 → XP_015728400.1  fibronectin type III and SPRY domain-containing protein 2

      UniProtKB/TrEMBL
      A0A8C2UFX9
      Related
      ENSCJPP00005025868.1, ENSCJPT00005035122.1
      Conserved Domains (3) summary
      cd00063
      Location:409 → 501
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd12899
      Location:600 → 775
      SPRY_PRY_TRIM76_like; PRY/SPRY domain in tripartite motif-containing protein 76 (TRIM76)-like
      cl23765
      Location:246 → 371
      iSH2_PI3K_IA_R; Inter-Src homology 2 (iSH2) helical domain of Class IA Phosphoinositide 3-kinase Regulatory subunits

    2. XM_015872913.2 → XP_015728399.1  fibronectin type III and SPRY domain-containing protein 2

      UniProtKB/TrEMBL
      A0A8C2UFX9
      Conserved Domains (3) summary
      cd00063
      Location:409 → 501
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd12899
      Location:600 → 775
      SPRY_PRY_TRIM76_like; PRY/SPRY domain in tripartite motif-containing protein 76 (TRIM76)-like
      cl23765
      Location:246 → 371
      iSH2_PI3K_IA_R; Inter-Src homology 2 (iSH2) helical domain of Class IA Phosphoinositide 3-kinase Regulatory subunits

    3. XM_015872912.2 → XP_015728398.1  fibronectin type III and SPRY domain-containing protein 2

      UniProtKB/TrEMBL
      A0A8C2UFX9
      Conserved Domains (3) summary
      cd00063
      Location:409 → 501
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd12899
      Location:600 → 775
      SPRY_PRY_TRIM76_like; PRY/SPRY domain in tripartite motif-containing protein 76 (TRIM76)-like
      cl23765
      Location:246 → 371
      iSH2_PI3K_IA_R; Inter-Src homology 2 (iSH2) helical domain of Class IA Phosphoinositide 3-kinase Regulatory subunits
    Nucleotide Protein
    Heading Accession and Version

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