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    LOC662437 condensin complex subunit 3 [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 662437, updated on 12-Apr-2024

    Summary

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    Gene symbol
    LOC662437
    Gene description
    condensin complex subunit 3
    Locus tag
    TcasGA2_TC007921
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
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    Genomic context

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    See LOC662437 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 9 NC_087402.1 (2917954..2927108)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG4 NC_007419.2 (2765183..2769740)

    Chromosome 9 - NC_087402.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135267178 Neighboring gene Splicing factor 3a subunit 2 Neighboring gene Ribosomal protein L27A Neighboring gene PDGF- and VEGF-receptor related Neighboring gene juvenile hormone esterase-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
    2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in mitotic chromosome condensation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in condensed chromosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of condensin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    condensin complex subunit 3
    Names
    AUGUSTUS-3.0.2_07921
    Condensin complex subunit 3-like Protein
    GLEAN_07921

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087402.1 Reference icTriCast1.1 Primary Assembly

      Range
      2917954..2927108
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008193621.3 → XP_008191843.1  condensin complex subunit 3

      UniProtKB/TrEMBL
      D2A325
      Conserved Domains (2) summary
      pfam12719
      Location:549 → 837
      Cnd3; Nuclear condensing complex subunits, C-term domain
      pfam13646
      Location:144 → 226
      HEAT_2; HEAT repeats
    Nucleotide Protein Strain
    Heading Accession and Version

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