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    PASHI_RS15640 Lrp/AsnC family transcriptional regulator [ Pseudoalteromonas shioyasakiensis ]

    Gene ID: 29846066, updated on 3-Dec-2024

    Summary

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    Gene symbol
    PASHI_RS15640
    Gene description
    Lrp/AsnC family transcriptional regulator
    Locus tag
    PASHI_RS15640
    Gene type
    protein coding
    Organism
    Pseudoalteromonas shioyasakiensis (strain: JCM 18891, type-material: type strain of Pseudoalteromonas shioyasakiensis)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas
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    Genomic context

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    NZ_LRUE01000020.1Genomic Context describing neighboring genes Neighboring gene MBL fold metallo-hydrolase Neighboring gene aminotransferase class V-fold PLP-dependent enzyme Neighboring gene monodechloroaminopyrrolnitrin synthase PrnB family protein Neighboring gene alpha/beta fold hydrolase Neighboring gene GNAT family N-acetyltransferase Neighboring gene DUF938 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_LRUE01000020.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Lrp family of transcriptional regulators. Brinkman AB, et al. Mol Microbiol, 2003 Apr. PMID 12675791
    2. The many faces of the helix-turn-helix domain: transcription regulation and beyond. Aravind L, et al. FEMS Microbiol Rev, 2005 Apr. PMID 15808743

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    Lrp/AsnC family transcriptional regulator

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_LRUE01000020.1 Reference assembly

      Range
      76474..76935
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_062566269.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Pseudoalteromonas]

      UniProtKB/TrEMBL
      A0A973I678, A0AAX2U3E8
      Conserved Domains (1) summary
      COG1522
      Location:1 → 152
      Lrp; DNA-binding transcriptional regulator, Lrp family [Transcription]
    Nucleotide Protein
    Heading Accession and Version