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    LOC107573077 alpha-parvin-like [ Sinocyclocheilus grahami ]

    Gene ID: 107573077, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC107573077
    Gene description
    alpha-parvin-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sinocyclocheilus grahami
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
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    Genomic context

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    See LOC107573077 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    100 current SAMN03320097.WGS_v1.1 (GCF_001515645.1) Unplaced Scaffold NW_015505209.1 (1705523..1717055)

    NW_015505209.1Genomic Context describing neighboring genes Neighboring gene dickkopf-related protein 3-like Neighboring gene protein-methionine sulfoxide oxidase mical2b-like Neighboring gene TEA domain family member 1a Neighboring gene Ras association domain family member 10a

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015505209.1 Unplaced Scaffold Reference SAMN03320097.WGS_v1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in establishment or maintenance of cell polarity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in substrate adhesion-dependent cell spreading IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in focal adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alpha-parvin-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sinocyclocheilus grahami Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SAMN03320097.WGS_v1.1 Primary Assembly

    Genomic

    1. NW_015505209.1 Reference SAMN03320097.WGS_v1.1 Primary Assembly

      Range
      1705523..1717055
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016259520.1 → XP_016115006.1  alpha-parvin-like

      UniProtKB/TrEMBL
      A0A672Q6Y6
    Nucleotide Protein
    Heading Accession and Version

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