U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    ligA protocatechuate 4,5-dioxygenase subunit alpha [ Aurantimicrobium minutum ]

    Gene ID: 80452798, updated on 3-May-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    ligA
    Gene description
    protocatechuate 4,5-dioxygenase subunit alpha
    Locus tag
    AUMI_RS08250
    Gene type
    protein coding
    Organism
    Aurantimicrobium minutum (strain: KNC, type-material: type strain of Aurantimicrobium minutum)
    Lineage
    Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Microbacteriaceae; Aurantimicrobium
    Old locus tag
    AUMI_19390
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: sequence1

    sequence1 - NZ_AP017457.1Genomic Context describing neighboring genes Neighboring gene Gfo/Idh/MocA family oxidoreductase Neighboring gene class III extradiol dioxygenase subunit beta Neighboring gene amidohydrolase family protein Neighboring gene amidohydrolase family protein Neighboring gene 4-oxalomesaconate tautomerase Neighboring gene 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NZ_AP017457.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Characterization of the 4-carboxy-4-hydroxy-2-oxoadipate aldolase gene and operon structure of the protocatechuate 4,5-cleavage pathway genes in Sphingomonas paucimobilis SYK-6. Hara H, et al. J Bacteriol, 2003 Jan. PMID 12486039, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    protocatechuate 4,5-dioxygenase subunit alpha
    WP_096381933.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_AP017457.1 Reference assembly

      Range
      990027..990425 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_096381933.1 protocatechuate 4,5-dioxygenase subunit alpha [Aurantimicrobium minutum]

      UniProtKB/TrEMBL
      A0A173LY88
      Conserved Domains (1) summary
      cl06673
      Location:3 → 130
      Extradiol_Dioxygenase_3A_like; Subunit A of Class III extradiol dioxygenases
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases