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    LOC108031654 steroid receptor seven-up [ Drosophila biarmipes ]

    Gene ID: 108031654, updated on 23-Nov-2023

    Summary

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    Gene symbol
    LOC108031654
    Gene description
    steroid receptor seven-up
    See related
    EnsemblRapid:LOC108031654
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila biarmipes
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
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    Genomic context

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    See LOC108031654 in Genome Data Viewer
    Location:
    chromosome: 3R
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current RU_DBia_V1.1 (GCF_025231255.1) 3R NC_066616.1 (17695100..17715050, complement)
    102 previous assembly ASM1814893v1 (GCF_018148935.1) Unplaced Scaffold NW_025319173.1 (14380457..14400312, complement)

    Chromosome 3R - NC_066616.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108031053 Neighboring gene anaphase-promoting complex subunit cdh1-like Neighboring gene keratin-associated protein 19-2 Neighboring gene uncharacterized LOC127011570

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in anatomical structure development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    steroid receptor seven-up; steroid receptor seven-up, isoforms B/C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila biarmipes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference RU_DBia_V1.1

    Genomic

    1. NC_066616.1 Reference RU_DBia_V1.1

      Range
      17695100..17715050 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017105289.3 → XP_016960778.1  steroid receptor seven-up, isoforms B/C isoform X2

      Related
      XP_016960778.1, XM_017105289.3

    2. XM_017105288.3 → XP_016960777.1  steroid receptor seven-up isoform X1

      Related
      XP_016960777.1, XM_017105288.3
    Nucleotide Protein Strain
    Heading Accession and Version

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