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    tsc22 TSC22 protein [ Ciona intestinalis (vase tunicate) ]

    Gene ID: 778785, updated on 21-Dec-2023

    Summary

    Gene symbol
    tsc22
    Gene description
    TSC22 protein
    See related
    Ensembl:ENSCING00000007168
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Ciona intestinalis
    Lineage
    Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona
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    Genomic context

    See tsc22 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    104 current KH (GCF_000224145.3) 7 NC_020172.2 (3769503..3777809, complement)

    Chromosome 7 - NC_020172.2Genomic Context describing neighboring genes Neighboring gene YEATS domain-containing protein 2 Neighboring gene cytochrome P450 2C42-like Neighboring gene tRNA wybutosine-synthesizing protein 3 homolog Neighboring gene uncharacterized LOC104265851 Neighboring gene plexin-B1 Neighboring gene microRNA mir-4192

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_020172.2 Chromosome 7 Reference KH Primary Assembly

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001078375.1NP_001071843.1  TSC22 protein

      See identical proteins and their annotated locations for NP_001071843.1

      Status: PROVISIONAL

      Source sequence(s)
      AB210734
      UniProtKB/TrEMBL
      A0A1W2VQ39, F6ZB59, Q4H2N8
      Related
      ENSCINP00000014707, ENSCINT00000014707
      Conserved Domains (1) summary
      pfam01166
      Location:456512
      TSC22; TSC-22/dip/bun family

    RefSeqs of Annotated Genomes: Ciona intestinalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference KH Primary Assembly

    Genomic

    1. NC_020172.2 Reference KH Primary Assembly

      Range
      3769503..3777809 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018812343.2XP_018667888.1  TSC22 protein isoform X1

      UniProtKB/TrEMBL
      F6ZB59