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    LOC109213121 profilin-1 [ Nicotiana attenuata ]

    Gene ID: 109213121, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC109213121
    Gene description
    profilin-1
    Locus tag
    A4A49_61676
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nicotiana attenuata
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
    Also known as
    PRO2_2; profilin-2
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    Genomic context

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    See LOC109213121 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current NIATTr2 (GCF_001879085.1) 2 NC_031990.1 (76547695..76550284, complement)

    Chromosome 2 - NC_031990.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109223043 Neighboring gene mediator of RNA polymerase II transcription subunit 6 Neighboring gene uncharacterized LOC109221241 Neighboring gene pentatricopeptide repeat-containing protein At2g20540-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_031990.1 Chromosome 2 Reference NIATTr2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular evolution and diversification of the Argonaute family of proteins in plants. Singh RK, et al. BMC Plant Biol, 2015 Jan 28. PMID 25626325, Free PMC Article
    2. Cytokinin levels and signaling respond to wounding and the perception of herbivore elicitors in Nicotiana attenuata. Schäfer M, et al. J Integr Plant Biol, 2015 Feb. PMID 24924599, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin monomer binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sequestering of actin monomers IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell cortex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    profilin-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nicotiana attenuata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NIATTr2

    Genomic

    1. NC_031990.1 Reference NIATTr2

      Range
      76547695..76550284 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019376885.1 → XP_019232430.1  profilin-1

      UniProtKB/TrEMBL
      A0A1J6JAA0
    Nucleotide Protein
    Heading Accession and Version

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