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    FRMPD4 FERM and PDZ domain containing 4 [ Alligator mississippiensis (American alligator) ]

    Gene ID: 102568545, updated on 3-Dec-2024

    Summary

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    Gene symbol
    FRMPD4
    Gene description
    FERM and PDZ domain containing 4
    Locus tag
    Y1Q_0022479
    See related
    EnsemblRapid:ENSAMIG00015023431
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Alligator mississippiensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
    Orthologs
    human mouse all
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    Genomic context

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    See FRMPD4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2023_09 current rAllMis1 (GCF_030867095.1) 1 NC_081824.1 (325548350..326039236, complement)
    102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017711692.1 (11220764..11703555, complement)

    Chromosome 1 - NC_081824.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109285008 Neighboring gene toll like receptor 7 Neighboring gene phosphoribosyl pyrophosphate synthetase 2 Neighboring gene small nucleolar RNA U3 Neighboring gene MSL complex subunit 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    FERM and PDZ domain-containing protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rAllMis1 Primary Assembly

    Genomic

    1. NC_081824.1 Reference rAllMis1 Primary Assembly

      Range
      325548350..326039236 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019495129.2 → XP_019350674.2  FERM and PDZ domain-containing protein 4 isoform X1

      UniProtKB/TrEMBL
      A0A151N0D0

    2. XM_014607778.3 → XP_014463264.2  FERM and PDZ domain-containing protein 4 isoform X2

      UniProtKB/TrEMBL
      A0A151N0D0

    3. XM_019495130.2 → XP_019350675.2  FERM and PDZ domain-containing protein 4 isoform X3

      UniProtKB/TrEMBL
      A0A151N0D0

    4. XM_019495131.2 → XP_019350676.1  FERM and PDZ domain-containing protein 4 isoform X4

      UniProtKB/TrEMBL
      A0A151N0L8
      Related
      ENSAMIP00015032062.1, ENSAMIT00015044451.1
    Nucleotide Protein
    Heading Accession and Version

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