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    LOC109305253 zinc finger protein 271-like [ Gavialis gangeticus (Gharial) ]

    Gene ID: 109305253, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC109305253
    Gene description
    zinc finger protein 271-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gavialis gangeticus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Longirostres; Gavialidae; Gavialinae; Gavialis
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    Genomic context

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    See LOC109305253 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current GavGan_comp1 (GCF_001723915.1) Unplaced Scaffold NW_017728992.1 (209110715..209125226)

    NW_017728992.1Genomic Context describing neighboring genes Neighboring gene GDP-L-fucose synthase Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene uncharacterized LOC109305254 Neighboring gene coiled-coil domain containing 166 Neighboring gene mitogen-activated protein kinase 15

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_017728992.1 Unplaced Scaffold Reference GavGan_comp1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 271-like; zinc finger protein 585A-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gavialis gangeticus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GavGan_comp1 Primary Assembly

    Genomic

    1. NW_017728992.1 Reference GavGan_comp1 Primary Assembly

      Range
      209110715..209125226
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019528271.1 → XP_019383816.1  zinc finger protein 271-like isoform X5

    2. XM_019528270.1 → XP_019383815.1  zinc finger protein 585A-like isoform X4

    3. XM_019528267.1 → XP_019383812.1  zinc finger protein 585A-like isoform X1

    4. XM_019528268.1 → XP_019383813.1  zinc finger protein 585A-like isoform X2

    5. XM_019528269.1 → XP_019383814.1  zinc finger protein 585A-like isoform X3

    Nucleotide Protein
    Heading Accession and Version

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