U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    tssK type VI secretion system baseplate subunit TssK [ Metapseudomonas otitidis ]

    Gene ID: 57398231, updated on 24-Oct-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    tssK
    Gene description
    type VI secretion system baseplate subunit TssK
    Locus tag
    PotMrB4_RS15115
    Gene type
    protein coding
    Organism
    Metapseudomonas otitidis (strain: MrB4)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Metapseudomonas
    Old locus tag
    PtoMrB4_30160
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help

    NZ_AP022642.1Genomic Context describing neighboring genes Neighboring gene PP2C family serine/threonine-protein phosphatase Neighboring gene type VI secretion system-associated protein TagF Neighboring gene type VI secretion system membrane subunit TssM Neighboring gene DotU family type VI secretion system protein Neighboring gene type VI secretion system lipoprotein TssJ Neighboring gene type VI secretion system-associated FHA domain protein TagH

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NZ_AP022642.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Type VI secretion TssK baseplate protein exhibits structural similarity with phage receptor-binding proteins and evolved to bind the membrane complex. Nguyen VS, et al. Nat Microbiol, 2017 Jun 26. PMID 28650463
    2. Complete Genome Sequence of Pseudomonas otitidis Strain MrB4, Isolated from Lake Biwa in Japan. Miyazaki K, et al. Microbiol Resour Announc, 2020 Apr 16. PMID 32299875, Free PMC Article
    3. In vivo expression technology identifies a type VI secretion system locus in Burkholderia pseudomallei that is induced upon invasion of macrophages. Shalom G, et al. Microbiology (Reading), 2007 Aug. PMID 17660433
    4. A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus. Mougous JD, et al. Science, 2006 Jun 9. PMID 16763151, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

    Go to the top of the page Help
    Preferred Names
    type VI secretion system baseplate subunit TssK

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_AP022642.1 Reference assembly

      Range
      3303979..3305313 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_074971463.1 MULTISPECIES: type VI secretion system baseplate subunit TssK [Pseudomonadaceae]

      UniProtKB/TrEMBL
      A0A1I0UH49
      Conserved Domains (1) summary
      COG3522
      Location:1 → 444
      COG3522; Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport]
    Nucleotide Protein
    Heading Accession and Version