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    PotMrB4_RS15160 type VI secretion system accessory protein TagJ [ Metapseudomonas otitidis ]

    Gene ID: 57398240, updated on 24-Oct-2024

    Summary

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    Gene symbol
    PotMrB4_RS15160
    Gene description
    type VI secretion system accessory protein TagJ
    Locus tag
    PotMrB4_RS15160
    Gene type
    protein coding
    Organism
    Metapseudomonas otitidis (strain: MrB4)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Metapseudomonas
    Old locus tag
    PtoMrB4_30250
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    Genomic context

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    NZ_AP022642.1Genomic Context describing neighboring genes Neighboring gene type VI secretion system tube protein Hcp Neighboring gene type VI secretion system amidase effector protein Tae4 Neighboring gene hypothetical protein Neighboring gene type VI secretion system baseplate subunit TssE Neighboring gene type VI secretion system baseplate subunit TssF Neighboring gene type VI secretion system baseplate subunit TssG

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_AP022642.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Infection-blocking genes of a symbiotic Rhizobium leguminosarum strain that are involved in temperature-dependent protein secretion. Bladergroen MR, et al. Mol Plant Microbe Interact, 2003 Jan. PMID 12580282
    2. Complete Genome Sequence of Pseudomonas otitidis Strain MrB4, Isolated from Lake Biwa in Japan. Miyazaki K, et al. Microbiol Resour Announc, 2020 Apr 16. PMID 32299875, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    type VI secretion system accessory protein TagJ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_AP022642.1 Reference assembly

      Range
      3312730..3313515
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_074971468.1 MULTISPECIES: type VI secretion system accessory protein TagJ [Pseudomonadaceae]

      UniProtKB/TrEMBL
      A0A1I0UJG8
      Conserved Domains (1) summary
      COG4455
      Location:1 → 256
      ImpE; Protein of avirulence locus involved in temperature-dependent protein secretion [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version