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    PotMrB4_RS15210 polymorphic toxin type 46 domain-containing protein [ Metapseudomonas otitidis ]

    Gene ID: 57398250, updated on 24-Oct-2024

    Summary

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    Gene symbol
    PotMrB4_RS15210
    Gene description
    polymorphic toxin type 46 domain-containing protein
    Locus tag
    PotMrB4_RS15210
    Gene type
    protein coding
    Organism
    Metapseudomonas otitidis (strain: MrB4)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Metapseudomonas
    Old locus tag
    PtoMrB4_30350
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    Genomic context

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    NZ_AP022642.1Genomic Context describing neighboring genes Neighboring gene gluconate 2-dehydrogenase subunit 3 family protein Neighboring gene GMC family oxidoreductase Neighboring gene immunity protein Tsi6 family protein Neighboring gene DcrB-related protein Neighboring gene ankyrin repeat domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_AP022642.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Polymorphic toxin systems: Comprehensive characterization of trafficking modes, processing, mechanisms of action, immunity and ecology using comparative genomics. Zhang D, et al. Biol Direct, 2012 Jun 25. PMID 22731697, Free PMC Article
    2. Complete Genome Sequence of Pseudomonas otitidis Strain MrB4, Isolated from Lake Biwa in Japan. Miyazaki K, et al. Microbiol Resour Announc, 2020 Apr 16. PMID 32299875, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    polymorphic toxin type 46 domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_AP022642.1 Reference assembly

      Range
      3324892..3326187 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_074971474.1 MULTISPECIES: polymorphic toxin type 46 domain-containing protein [Pseudomonadaceae]

      UniProtKB/TrEMBL
      A0A679GL11
      Conserved Domains (2) summary
      cd14742
      Location:80 → 161
      PAAR_RHS; proline-alanine-alanine-arginine (PAAR) domain, also containing C-terminal Rearrangement hotspot (Rhs) extensions
      pfam15538
      Location:267 → 423
      Ntox46; Bacterial toxin 46
    Nucleotide Protein
    Heading Accession and Version