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    LOC109464732 probable ATP-dependent RNA helicase DDX10 [ Branchiostoma belcheri (Belcher's lancelet) ]

    Gene ID: 109464732, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC109464732
    Gene description
    probable ATP-dependent RNA helicase DDX10
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Branchiostoma belcheri
    Lineage
    Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes; Branchiostomatidae; Branchiostoma
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    Genomic context

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    See LOC109464732 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    100 current Haploidv18h27 (GCF_001625305.1) Unplaced Scaffold NW_017802824.1 (3994796..4008006, complement)

    NW_017802824.1Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat flightless-interacting protein 2-like Neighboring gene spermine synthase-like Neighboring gene uncharacterized LOC109464580 Neighboring gene metabotropic glutamate receptor 3-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_017802824.1 Unplaced Scaffold Reference Haploidv18h27 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in rRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable ATP-dependent RNA helicase DDX10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Branchiostoma belcheri Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Haploidv18h27 Primary Assembly

    Genomic

    1. NW_017802824.1 Reference Haploidv18h27 Primary Assembly

      Range
      3994796..4008006 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019761805.1 → XP_019617364.1  probable ATP-dependent RNA helicase DDX10

      UniProtKB/TrEMBL
      A0A6P4Y4P2
    Nucleotide Protein
    Heading Accession and Version

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