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    LOC109483065 arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1-like [ Branchiostoma belcheri (Belcher's lancelet) ]

    Gene ID: 109483065, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC109483065
    Gene description
    arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Branchiostoma belcheri
    Lineage
    Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes; Branchiostomatidae; Branchiostoma
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    Genomic context

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    See LOC109483065 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    34
    Annotation release Status Assembly Chr Location
    100 current Haploidv18h27 (GCF_001625305.1) Unplaced Scaffold NW_017804265.1 (1309743..1360342)

    NW_017804265.1Genomic Context describing neighboring genes Neighboring gene tribbles homolog 2-like Neighboring gene E3 SUMO-protein ligase NSE2-like Neighboring gene contactin-associated protein-like 2 Neighboring gene uncharacterized LOC109483042 Neighboring gene immunoglobulin superfamily containing leucine-rich repeat protein-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_017804265.1 Unplaced Scaffold Reference Haploidv18h27 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1-like; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Branchiostoma belcheri Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Haploidv18h27 Primary Assembly

    Genomic

    1. NW_017804265.1 Reference Haploidv18h27 Primary Assembly

      Range
      1309743..1360342
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019786026.1 → XP_019641585.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2-like isoform X6

      UniProtKB/TrEMBL
      A0A6P4ZK42

    2. XM_019786024.1 → XP_019641583.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1-like isoform X4

      UniProtKB/TrEMBL
      A0A6P4ZXG8

    3. XM_019786021.1 → XP_019641580.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1-like isoform X1

      UniProtKB/TrEMBL
      A0A6P4ZK37

    4. XM_019786023.1 → XP_019641582.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1-like isoform X3

      UniProtKB/TrEMBL
      A0A6P5AE88

    5. XM_019786022.1 → XP_019641581.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1-like isoform X2

      UniProtKB/TrEMBL
      A0A6P5AI59

    6. XM_019786025.1 → XP_019641584.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1-like isoform X5

      UniProtKB/TrEMBL
      A0A6P5A5M9
    Nucleotide Protein
    Heading Accession and Version

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