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    AMOT angiomotin [ Bos indicus (zebu cattle) ]

    Gene ID: 109555143, updated on 14-Mar-2024

    Summary

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    Gene symbol
    AMOT
    Gene description
    angiomotin
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos indicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See AMOT in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    100 current Bos_indicus_1.0 (GCF_000247795.1) X NC_032679.1 (38963163..39031280)

    Chromosome X - NC_032679.1Genomic Context describing neighboring genes Neighboring gene transient receptor potential cation channel subfamily C member 5 Neighboring gene TRPC5 opposite strand Neighboring gene zinc finger CCHC domain-containing protein 16-like Neighboring gene retrotransposon Gag like 4 Neighboring gene uncharacterized LOC109555536 Neighboring gene LHFPL tetraspan subfamily member 1 Neighboring gene zinc finger CCHC domain-containing protein 16-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_032679.1 Chromosome X Reference Bos_indicus_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in angiogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in establishment of cell polarity involved in ameboidal cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in hippo signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in bicellular tight junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lamellipodium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    angiomotin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Bos_indicus_1.0 Primary Assembly

    Genomic

    1. NC_032679.1 Reference Bos_indicus_1.0 Primary Assembly

      Range
      38963163..39031280
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019955735.1 → XP_019811294.1  angiomotin isoform X1

      UniProtKB/TrEMBL
      A0A6P5AX55
      Conserved Domains (3) summary
      pfam12240
      Location:592 → 795
      Angiomotin_C; Angiomotin C terminal
      cl25732
      Location:432 → 683
      SMC_N; RecF/RecN/SMC N terminal domain
      cl28087
      Location:196 → 328
      FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]

    2. XM_019955734.1 → XP_019811293.1  angiomotin isoform X1

      UniProtKB/TrEMBL
      A0A6P5AX55
      Conserved Domains (3) summary
      pfam12240
      Location:592 → 795
      Angiomotin_C; Angiomotin C terminal
      cl25732
      Location:432 → 683
      SMC_N; RecF/RecN/SMC N terminal domain
      cl28087
      Location:196 → 328
      FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]

    3. XM_019955738.1 → XP_019811297.1  angiomotin isoform X4

      UniProtKB/TrEMBL
      A0A6P5BEY3
      Conserved Domains (2) summary
      pfam12240
      Location:190 → 393
      Angiomotin_C; Angiomotin C terminal
      cl25732
      Location:22 → 267
      SMC_N; RecF/RecN/SMC N terminal domain

    4. XM_019955737.1 → XP_019811296.1  angiomotin isoform X3

      UniProtKB/TrEMBL
      A0A6P5B2X8
      Conserved Domains (3) summary
      pfam12240
      Location:329 → 532
      Angiomotin_C; Angiomotin C terminal
      cl25716
      Location:42 → 109
      Amelogenin
      cl25732
      Location:168 → 415
      SMC_N; RecF/RecN/SMC N terminal domain

    5. XM_019955736.1 → XP_019811295.1  angiomotin isoform X2

      UniProtKB/TrEMBL
      A0A6P5BLL3
      Conserved Domains (3) summary
      pfam12240
      Location:470 → 673
      Angiomotin_C; Angiomotin C terminal
      cl25732
      Location:331 → 557
      SMC_N; RecF/RecN/SMC N terminal domain
      cl28087
      Location:105 → 237
      FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]
    Nucleotide Protein
    Heading Accession and Version

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