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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_052833.1 RefSeqGene
- Range
-
5006..84924
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001348353.1 → NP_001335282.1 transcription initiation factor IIE subunit beta isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, 3' UTR, and 3' coding sequence compared to variant 1. The resulting isoform (2) has a shorter and distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
AC102945, AC103959
- UniProtKB/TrEMBL
-
E5RH41
- Conserved Domains (2) summary
-
- cd07977
Location:68 → 146
- TFIIE_beta_winged_helix; TFIIE_beta_winged_helix domain, located at the central core region of TFIIE beta, with double-stranded DNA binding activity
- pfam18121
Location:146 → 204
- TFA2_Winged_2; TFA2 Winged helix domain 2
-
NM_002095.6 → NP_002086.1 transcription initiation factor IIE subunit beta isoform 1
See identical proteins and their annotated locations for NP_002086.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AA483281, BC030572, BX421791
- Consensus CDS
-
CCDS6078.1
- UniProtKB/Swiss-Prot
- D3DSV2, P29084, Q9H2B9
- Related
- ENSP00000348168.4, ENST00000355904.9
- Conserved Domains (2) summary
-
- cd07977
Location:68 → 146
- TFIIE_beta_winged_helix; TFIIE_beta_winged_helix domain, located at the central core region of TFIIE beta, with double-stranded DNA binding activity
- pfam18121
Location:146 → 204
- TFA2_Winged_2; TFA2 Winged helix domain 2
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000008.11 Reference GRCh38.p14 Primary Assembly
- Range
-
30578318..30658236 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017013364.2 → XP_016868853.1 transcription initiation factor IIE subunit beta isoform X1
- UniProtKB/Swiss-Prot
- D3DSV2, P29084, Q9H2B9
- Conserved Domains (2) summary
-
- cd07977
Location:68 → 146
- TFIIE_beta_winged_helix; TFIIE_beta_winged_helix domain, located at the central core region of TFIIE beta, with double-stranded DNA binding activity
- pfam18121
Location:146 → 204
- TFA2_Winged_2; TFA2 Winged helix domain 2
-
XM_017013363.2 → XP_016868852.1 transcription initiation factor IIE subunit beta isoform X1
- UniProtKB/Swiss-Prot
- D3DSV2, P29084, Q9H2B9
- Conserved Domains (2) summary
-
- cd07977
Location:68 → 146
- TFIIE_beta_winged_helix; TFIIE_beta_winged_helix domain, located at the central core region of TFIIE beta, with double-stranded DNA binding activity
- pfam18121
Location:146 → 204
- TFA2_Winged_2; TFA2 Winged helix domain 2
-
XM_024447138.2 → XP_024302906.1 transcription initiation factor IIE subunit beta isoform X1
- UniProtKB/Swiss-Prot
- D3DSV2, P29084, Q9H2B9
- Conserved Domains (2) summary
-
- cd07977
Location:68 → 146
- TFIIE_beta_winged_helix; TFIIE_beta_winged_helix domain, located at the central core region of TFIIE beta, with double-stranded DNA binding activity
- pfam18121
Location:146 → 204
- TFA2_Winged_2; TFA2 Winged helix domain 2
-
XM_011544509.3 → XP_011542811.1 transcription initiation factor IIE subunit beta isoform X2
See identical proteins and their annotated locations for XP_011542811.1
- UniProtKB/TrEMBL
-
E5RH41
- Conserved Domains (2) summary
-
- cd07977
Location:68 → 146
- TFIIE_beta_winged_helix; TFIIE_beta_winged_helix domain, located at the central core region of TFIIE beta, with double-stranded DNA binding activity
- pfam18121
Location:146 → 204
- TFA2_Winged_2; TFA2 Winged helix domain 2
-
XM_011544510.2 → XP_011542812.1 transcription initiation factor IIE subunit beta isoform X3
- UniProtKB/TrEMBL
-
E5RH41
- Related
- ENSP00000429921.1, ENST00000518599.5
- Conserved Domains (1) summary
-
- cd07977
Location:68 → 146
- TFIIE_beta_winged_helix; TFIIE_beta_winged_helix domain, located at the central core region of TFIIE beta, with double-stranded DNA binding activity
Alternate T2T-CHM13v2.0
Genomic
-
NC_060932.1 Alternate T2T-CHM13v2.0
- Range
-
30857764..30937703 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054360372.1 → XP_054216347.1 transcription initiation factor IIE subunit beta isoform X1
- UniProtKB/Swiss-Prot
- D3DSV2, P29084, Q9H2B9
-
XM_054360371.1 → XP_054216346.1 transcription initiation factor IIE subunit beta isoform X1
- UniProtKB/Swiss-Prot
- D3DSV2, P29084, Q9H2B9
-
XM_054360373.1 → XP_054216348.1 transcription initiation factor IIE subunit beta isoform X1
- UniProtKB/Swiss-Prot
- D3DSV2, P29084, Q9H2B9
-
XM_054360374.1 → XP_054216349.1 transcription initiation factor IIE subunit beta isoform X2
- UniProtKB/TrEMBL
-
E5RH41
-
XM_054360375.1 → XP_054216350.1 transcription initiation factor IIE subunit beta isoform X3
- UniProtKB/TrEMBL
-
E5RH41