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    PCOAH_00052430 snf7-like protein [ Plasmodium coatneyi ]

    Gene ID: 30911977, updated on 5-Sep-2024

    Summary

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    Gene symbol
    PCOAH_00052430
    Gene description
    snf7-like protein
    Locus tag
    PCOAH_00052430
    See related
    PlasmoDB:PCOAH_00052430; VEuPathDB:PCOAH_00052430
    Gene type
    protein coding
    RNA name
    snf7-like protein
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium coatneyi (strain: Hackeri)
    Lineage
    Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium
    Orthologs
    Plasmodium falciparum all
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    Genomic context

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    Location:
    chromosome: 14
    Exon count:
    8
    Sequence:
    Chromosome: 14; NC_033569.1 (508996..510745)

    Chromosome 14 - NC_033569.1Genomic Context describing neighboring genes Neighboring gene Ubiquitin-conjugating enzyme Neighboring gene Translation initiation factor SUI1 Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_033569.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. High-Quality Genome Assembly and Annotation for Plasmodium coatneyi, Generated Using Single-Molecule Real-Time PacBio Technology. Chien JT, et al. Genome Announc, 2016 Sep 1. PMID 27587810, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in late endosome to vacuole transport via multivesicular body sorting pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle budding from membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ESCRT III complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasmic side of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in multivesicular body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    snf7-like protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_033569.1 Reference assembly

      Range
      508996..510745
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020062023.1 → XP_019917736.1  snf7-like protein [Plasmodium coatneyi]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1B1E7R3
      Conserved Domains (1) summary
      PTZ00446
      Location:1 → 182
      PTZ00446; vacuolar sorting protein SNF7-like; Provisional
    Nucleotide Protein
    Heading Accession and Version

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