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    CANTADRAFT_35782 hypothetical protein [ Suhomyces tanzawaensis NRRL Y-17324 ]

    Gene ID: 30982789, updated on 14-Dec-2023

    Summary

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    Gene symbol
    CANTADRAFT_35782
    Gene description
    hypothetical protein
    Locus tag
    CANTADRAFT_35782
    Gene type
    protein coding
    RNA name
    uncharacterized protein
    RefSeq status
    PROVISIONAL
    Organism
    Suhomyces tanzawaensis NRRL Y-17324 (strain: NRRL Y-17324, type-material: type material of Suhomyces tanzawaensis)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Suhomyces
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    Genomic context

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    See CANTADRAFT_35782 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_017963642.1Genomic Context describing neighboring genes Neighboring gene P-loop containing nucleoside triphosphate hydrolase protein Neighboring gene hypothetical protein Neighboring gene L domain-like protein Neighboring gene the plant PR-1 class of pathogen related protein-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_017963642.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomics of biotechnologically important yeasts. Riley R, et al. Proc Natl Acad Sci U S A, 2016 Aug 30. PMID 27535936, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein
    XP_020062607.1
    • expressed protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_017963642.1 Reference assembly

      Range
      677436..680276 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020208652.2 → XP_020062607.1  uncharacterized protein CANTADRAFT_35782, partial [Suhomyces tanzawaensis NRRL Y-17324]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1E4SDA4
      Conserved Domains (3) summary
      cd12148
      Location:249 → 729
      fungal_TF_MHR; fungal transcription factor regulatory middle homology region
      cd00067
      Location:23 → 56
      GAL4; GAL4-like Zn2Cys6 binuclear cluster DNA-binding domain; found in transcription regulators like GAL4. Domain consists of two helices organized around a Zn(2)Cys(6 )motif; Binds to sequences containing 2 DNA half sites comprised of 3-5 C/G combinations
      cl00459
      Location:714 → 791
      MIT_CorA-like; metal ion transporter CorA-like divalent cation transporter superfamily
    Protein Accession Links
    GenPept Link UniProtKB Link
    ODV77485.1

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