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    T04B2.3 Shieldin complex subunit 1 [ Caenorhabditis elegans ]

    Gene ID: 177868, updated on 18-Sep-2024

    Summary

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    Official Symbol
    T04B2.3
    Official Full Name
    Shieldin complex subunit 1
    Primary source
    WormBase:WBGene00011422
    Locus tag
    CELE_T04B2.3
    See related
    AllianceGenome:WB:WBGene00011422
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See T04B2.3 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    9
    Sequence:
    Chromosome: IV; NC_003282.8 (10047408..10050572)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Fer-related kinase 1 Neighboring gene Secreted protein Neighboring gene G_PROTEIN_RECEP_F1_2 domain-containing protein Neighboring gene ncRNA Neighboring gene DUF2780 domain-containing protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
    2. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Shieldin complex subunit 1
    NP_001040982.1
    • Partially confirmed by transcript evidence
    NP_001040983.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      10047408..10050572
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001047517.2 → NP_001040982.1  Shieldin complex subunit 1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001040982.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q22147

    2. NM_001047518.3 → NP_001040983.1  Shieldin complex subunit 1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001040983.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q1NZ27
    Nucleotide Protein
    Heading Accession and Version

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