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    Y48G8AR.2 FYVE-type domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 171702, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y48G8AR.2
    Official Full Name
    FYVE-type domain-containing protein
    Primary source
    WormBase:WBGene00021693
    Locus tag
    CELE_Y48G8AR.2
    See related
    AllianceGenome:WB:WBGene00021693
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable metal ion binding activity. Orthologous to human SYTL3 (synaptotagmin like 3). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y48G8AR.2 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    9
    Sequence:
    Chromosome: I; NC_003279.8 (1282101..1285435)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Origin recognition complex subunit 1 Neighboring gene Death-associated protein kinase dapk-1;non-specific serine/threonine protein kinase Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    FYVE-type domain-containing protein
    NP_490838.3
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      1282101..1285435
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_058437.7 → NP_490838.3  FYVE-type domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_490838.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9N3N6
      Conserved Domains (2) summary
      cd15747
      Location:95 → 148
      FYVE_Slp3_4_5; FYVE-related domain found in the synaptotagmin-like proteins 3, 4, 5
      cl22851
      Location:15 → 159
      PHD_SF; PHD finger superfamily
    Nucleotide Protein
    Heading Accession and Version

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